Protein–RNA interactions for Protein: A0A0B4J1H0

Trbv12-1, T cell receptor beta, variable 12-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-1A0A0B4J1H0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.91■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.91■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.91■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Gm15375-201ENSMUST00000119510 849 ntBASIC15.91■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Gm12669-201ENSMUST00000122162 1009 ntBASIC15.91■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv12-1A0A0B4J1H0 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.9■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC15.9■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Gm18666-201ENSMUST00000190039 958 ntBASIC15.9■□□□□ 0.14
Trbv12-1A0A0B4J1H0 AC135637.1-201ENSMUST00000227750 365 ntBASIC15.9■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trbv12-1A0A0B4J1H0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC15.89■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Gm20760-201ENSMUST00000179197 648 ntBASIC15.89■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Gm29241-201ENSMUST00000189260 1096 ntBASIC15.89■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Gm44878-201ENSMUST00000205812 1295 ntBASIC15.89■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv12-1A0A0B4J1H0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC15.89■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv12-1A0A0B4J1H0 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv12-1A0A0B4J1H0 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.88■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Gm11643-201ENSMUST00000119578 864 ntBASIC15.88■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC15.88■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC15.88■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Fam105a-203ENSMUST00000226170 3043 ntBASIC15.88■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv12-1A0A0B4J1H0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trbv12-1A0A0B4J1H0 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.87■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Idnk-204ENSMUST00000226010 1898 ntBASIC15.87■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv12-1A0A0B4J1H0 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.87■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.87■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Gm10654-201ENSMUST00000098653 1633 ntBASIC15.86■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.86■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trbv12-1A0A0B4J1H0 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 22 ms