Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC13.9□□□□□ -0.18
Trbv3A0A0A6YYE2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv3A0A0A6YYE2 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.9□□□□□ -0.18
Trbv3A0A0A6YYE2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv3A0A0A6YYE2 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv3A0A0A6YYE2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv3A0A0A6YYE2 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trbv3A0A0A6YYE2 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trbv3A0A0A6YYE2 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trbv3A0A0A6YYE2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv3A0A0A6YYE2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv3A0A0A6YYE2 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv3A0A0A6YYE2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trbv3A0A0A6YYE2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv3A0A0A6YYE2 Gm42918-201ENSMUST00000199249 1580 ntBASIC13.89□□□□□ -0.19
Trbv3A0A0A6YYE2 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv3A0A0A6YYE2 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv3A0A0A6YYE2 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv3A0A0A6YYE2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv3A0A0A6YYE2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv3A0A0A6YYE2 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC13.89□□□□□ -0.19
Trbv3A0A0A6YYE2 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv3A0A0A6YYE2 CT030146.1-201ENSMUST00000220919 217 ntBASIC13.89□□□□□ -0.19
Trbv3A0A0A6YYE2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv3A0A0A6YYE2 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv3A0A0A6YYE2 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC13.89□□□□□ -0.19
Trbv3A0A0A6YYE2 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trbv3A0A0A6YYE2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv3A0A0A6YYE2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trbv3A0A0A6YYE2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Trbv3A0A0A6YYE2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv3A0A0A6YYE2 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Trbv3A0A0A6YYE2 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trbv3A0A0A6YYE2 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trbv3A0A0A6YYE2 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trbv3A0A0A6YYE2 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv3A0A0A6YYE2 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv3A0A0A6YYE2 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv3A0A0A6YYE2 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv3A0A0A6YYE2 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv3A0A0A6YYE2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv3A0A0A6YYE2 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv3A0A0A6YYE2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv3A0A0A6YYE2 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv3A0A0A6YYE2 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv3A0A0A6YYE2 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv3A0A0A6YYE2 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Trbv3A0A0A6YYE2 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC13.88□□□□□ -0.19
Trbv3A0A0A6YYE2 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv3A0A0A6YYE2 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv3A0A0A6YYE2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Trbv3A0A0A6YYE2 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC13.88□□□□□ -0.19
Trbv3A0A0A6YYE2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.88□□□□□ -0.19
Trbv3A0A0A6YYE2 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv3A0A0A6YYE2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv3A0A0A6YYE2 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv3A0A0A6YYE2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv3A0A0A6YYE2 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv3A0A0A6YYE2 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Trbv3A0A0A6YYE2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv3A0A0A6YYE2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trbv3A0A0A6YYE2 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv3A0A0A6YYE2 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv3A0A0A6YYE2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Trbv3A0A0A6YYE2 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv3A0A0A6YYE2 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv3A0A0A6YYE2 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv3A0A0A6YYE2 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv3A0A0A6YYE2 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Trbv3A0A0A6YYE2 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.87□□□□□ -0.19
Trbv3A0A0A6YYE2 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv3A0A0A6YYE2 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv3A0A0A6YYE2 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC13.87□□□□□ -0.19
Trbv3A0A0A6YYE2 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv3A0A0A6YYE2 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv3A0A0A6YYE2 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv3A0A0A6YYE2 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv3A0A0A6YYE2 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv3A0A0A6YYE2 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv3A0A0A6YYE2 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv3A0A0A6YYE2 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv3A0A0A6YYE2 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv3A0A0A6YYE2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv3A0A0A6YYE2 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv3A0A0A6YYE2 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Trbv3A0A0A6YYE2 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC13.86□□□□□ -0.19
Trbv3A0A0A6YYE2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv3A0A0A6YYE2 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv3A0A0A6YYE2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Trbv3A0A0A6YYE2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv3A0A0A6YYE2 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv3A0A0A6YYE2 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC13.86□□□□□ -0.19
Trbv3A0A0A6YYE2 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC13.86□□□□□ -0.19
Trbv3A0A0A6YYE2 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC13.86□□□□□ -0.19
Trbv3A0A0A6YYE2 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv3A0A0A6YYE2 AC137127.1-201ENSMUST00000213466 1078 ntBASIC13.86□□□□□ -0.19
Trbv3A0A0A6YYE2 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.86□□□□□ -0.19
Trbv3A0A0A6YYE2 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv3A0A0A6YYE2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trbv3A0A0A6YYE2 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 94.7 ms