Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16A0A075B653 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trav16A0A075B653 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16A0A075B653 Gm5421-201ENSMUST00000181698 2354 ntBASIC13.92□□□□□ -0.18
Trav16A0A075B653 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16A0A075B653 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16A0A075B653 Gm45102-201ENSMUST00000207427 857 ntBASIC13.92□□□□□ -0.18
Trav16A0A075B653 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
Trav16A0A075B653 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16A0A075B653 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16A0A075B653 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Trav16A0A075B653 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16A0A075B653 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16A0A075B653 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16A0A075B653 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16A0A075B653 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16A0A075B653 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16A0A075B653 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16A0A075B653 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trav16A0A075B653 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16A0A075B653 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16A0A075B653 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16A0A075B653 Zcchc6-207ENSMUST00000225576 2499 ntBASIC13.91□□□□□ -0.18
Trav16A0A075B653 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16A0A075B653 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16A0A075B653 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16A0A075B653 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav16A0A075B653 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav16A0A075B653 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16A0A075B653 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16A0A075B653 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16A0A075B653 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16A0A075B653 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Trav16A0A075B653 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav16A0A075B653 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trav16A0A075B653 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16A0A075B653 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC13.91□□□□□ -0.18
Trav16A0A075B653 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC13.91□□□□□ -0.18
Trav16A0A075B653 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16A0A075B653 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16A0A075B653 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16A0A075B653 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
Trav16A0A075B653 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16A0A075B653 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16A0A075B653 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16A0A075B653 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.91□□□□□ -0.18
Trav16A0A075B653 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trav16A0A075B653 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav16A0A075B653 Gm43294-201ENSMUST00000202850 2490 ntBASIC13.9□□□□□ -0.18
Trav16A0A075B653 AC165080.2-201ENSMUST00000217491 1530 ntBASIC13.9□□□□□ -0.18
Trav16A0A075B653 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav16A0A075B653 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav16A0A075B653 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav16A0A075B653 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav16A0A075B653 Gm14117-201ENSMUST00000122417 843 ntBASIC13.9□□□□□ -0.18
Trav16A0A075B653 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC13.9□□□□□ -0.18
Trav16A0A075B653 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC13.9□□□□□ -0.18
Trav16A0A075B653 Rps24-207ENSMUST00000224568 714 ntBASIC13.9□□□□□ -0.18
Trav16A0A075B653 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trav16A0A075B653 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Trav16A0A075B653 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trav16A0A075B653 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav16A0A075B653 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav16A0A075B653 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav16A0A075B653 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav16A0A075B653 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav16A0A075B653 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav16A0A075B653 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav16A0A075B653 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav16A0A075B653 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trav16A0A075B653 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav16A0A075B653 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav16A0A075B653 Gm9194-201ENSMUST00000220749 1447 ntBASIC13.9□□□□□ -0.19
Trav16A0A075B653 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav16A0A075B653 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trav16A0A075B653 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16A0A075B653 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16A0A075B653 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16A0A075B653 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16A0A075B653 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav16A0A075B653 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.89□□□□□ -0.19
Trav16A0A075B653 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16A0A075B653 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Trav16A0A075B653 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16A0A075B653 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav16A0A075B653 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC13.89□□□□□ -0.19
Trav16A0A075B653 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16A0A075B653 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16A0A075B653 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16A0A075B653 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16A0A075B653 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16A0A075B653 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Trav16A0A075B653 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16A0A075B653 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16A0A075B653 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Trav16A0A075B653 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
Trav16A0A075B653 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC13.88□□□□□ -0.19
Trav16A0A075B653 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
Trav16A0A075B653 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Trav16A0A075B653 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms