Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-4-dv10A0A075B651 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav4-4-dv10A0A075B651 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Trav4-4-dv10A0A075B651 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-4-dv10A0A075B651 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-4-dv10A0A075B651 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-4-dv10A0A075B651 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-4-dv10A0A075B651 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-4-dv10A0A075B651 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Trav4-4-dv10A0A075B651 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.06□□□□□ -0.16
Trav4-4-dv10A0A075B651 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Trav4-4-dv10A0A075B651 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-4-dv10A0A075B651 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Trav4-4-dv10A0A075B651 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-4-dv10A0A075B651 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-4-dv10A0A075B651 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-4-dv10A0A075B651 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-4-dv10A0A075B651 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-4-dv10A0A075B651 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-4-dv10A0A075B651 Gm13146-201ENSMUST00000118508 780 ntBASIC14.05□□□□□ -0.16
Trav4-4-dv10A0A075B651 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-4-dv10A0A075B651 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.05□□□□□ -0.16
Trav4-4-dv10A0A075B651 AC121598.2-201ENSMUST00000228376 2325 ntBASIC14.05□□□□□ -0.16
Trav4-4-dv10A0A075B651 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-4-dv10A0A075B651 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-4-dv10A0A075B651 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.05□□□□□ -0.16
Trav4-4-dv10A0A075B651 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-4-dv10A0A075B651 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC14.05□□□□□ -0.16
Trav4-4-dv10A0A075B651 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Trav4-4-dv10A0A075B651 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav4-4-dv10A0A075B651 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Trav4-4-dv10A0A075B651 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-4-dv10A0A075B651 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-4-dv10A0A075B651 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-4-dv10A0A075B651 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-4-dv10A0A075B651 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-4-dv10A0A075B651 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.04□□□□□ -0.16
Trav4-4-dv10A0A075B651 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-4-dv10A0A075B651 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-4-dv10A0A075B651 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.04□□□□□ -0.16
Trav4-4-dv10A0A075B651 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-4-dv10A0A075B651 Appbp2os-202ENSMUST00000206972 447 ntBASIC14.04□□□□□ -0.16
Trav4-4-dv10A0A075B651 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trav4-4-dv10A0A075B651 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-4-dv10A0A075B651 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.04□□□□□ -0.16
Trav4-4-dv10A0A075B651 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-4-dv10A0A075B651 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-4-dv10A0A075B651 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-4-dv10A0A075B651 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.04□□□□□ -0.16
Trav4-4-dv10A0A075B651 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-4-dv10A0A075B651 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-4-dv10A0A075B651 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Trav4-4-dv10A0A075B651 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-4-dv10A0A075B651 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-4-dv10A0A075B651 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.04□□□□□ -0.16
Trav4-4-dv10A0A075B651 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trav4-4-dv10A0A075B651 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4-4-dv10A0A075B651 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4-4-dv10A0A075B651 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4-4-dv10A0A075B651 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav4-4-dv10A0A075B651 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
Trav4-4-dv10A0A075B651 Gm13534-201ENSMUST00000121169 513 ntBASIC14.03□□□□□ -0.16
Trav4-4-dv10A0A075B651 Gm22325-201ENSMUST00000158904 308 ntBASIC14.03□□□□□ -0.16
Trav4-4-dv10A0A075B651 Gm27454-201ENSMUST00000185090 204 ntBASIC14.03□□□□□ -0.16
Trav4-4-dv10A0A075B651 Gm43060-201ENSMUST00000200621 289 ntBASIC14.03□□□□□ -0.16
Trav4-4-dv10A0A075B651 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4-4-dv10A0A075B651 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4-4-dv10A0A075B651 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Trav4-4-dv10A0A075B651 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4-4-dv10A0A075B651 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Trav4-4-dv10A0A075B651 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.03□□□□□ -0.16
Trav4-4-dv10A0A075B651 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4-4-dv10A0A075B651 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4-4-dv10A0A075B651 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4-4-dv10A0A075B651 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4-4-dv10A0A075B651 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4-4-dv10A0A075B651 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav4-4-dv10A0A075B651 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Trav4-4-dv10A0A075B651 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav4-4-dv10A0A075B651 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav4-4-dv10A0A075B651 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav4-4-dv10A0A075B651 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav4-4-dv10A0A075B651 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav4-4-dv10A0A075B651 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav4-4-dv10A0A075B651 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav4-4-dv10A0A075B651 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav4-4-dv10A0A075B651 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav4-4-dv10A0A075B651 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav4-4-dv10A0A075B651 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav4-4-dv10A0A075B651 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav4-4-dv10A0A075B651 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav4-4-dv10A0A075B651 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav4-4-dv10A0A075B651 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav4-4-dv10A0A075B651 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-4-dv10A0A075B651 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-4-dv10A0A075B651 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-4-dv10A0A075B651 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav4-4-dv10A0A075B651 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav4-4-dv10A0A075B651 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav4-4-dv10A0A075B651 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms