Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-7-dv9A0A075B639 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-7-dv9A0A075B639 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-7-dv9A0A075B639 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Trav6-7-dv9A0A075B639 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-7-dv9A0A075B639 Gm42569-201ENSMUST00000200539 472 ntBASIC15.98■□□□□ 0.15
Trav6-7-dv9A0A075B639 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.98■□□□□ 0.15
Trav6-7-dv9A0A075B639 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-7-dv9A0A075B639 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-7-dv9A0A075B639 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-7-dv9A0A075B639 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-7-dv9A0A075B639 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-7-dv9A0A075B639 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-7-dv9A0A075B639 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-7-dv9A0A075B639 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Trav6-7-dv9A0A075B639 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Trav6-7-dv9A0A075B639 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC15.97■□□□□ 0.15
Trav6-7-dv9A0A075B639 Dmtn-207ENSMUST00000228001 2437 ntBASIC15.97■□□□□ 0.15
Trav6-7-dv9A0A075B639 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Trav6-7-dv9A0A075B639 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-7-dv9A0A075B639 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.97■□□□□ 0.15
Trav6-7-dv9A0A075B639 Fst-202ENSMUST00000223640 2612 ntBASIC15.97■□□□□ 0.15
Trav6-7-dv9A0A075B639 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-7-dv9A0A075B639 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-7-dv9A0A075B639 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-7-dv9A0A075B639 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-7-dv9A0A075B639 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-7-dv9A0A075B639 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-7-dv9A0A075B639 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-7-dv9A0A075B639 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-7-dv9A0A075B639 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Trav6-7-dv9A0A075B639 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-7-dv9A0A075B639 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-7-dv9A0A075B639 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-7-dv9A0A075B639 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-7-dv9A0A075B639 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Trav6-7-dv9A0A075B639 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-7-dv9A0A075B639 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Trav6-7-dv9A0A075B639 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-7-dv9A0A075B639 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC15.96■□□□□ 0.15
Trav6-7-dv9A0A075B639 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
Trav6-7-dv9A0A075B639 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-7-dv9A0A075B639 Gm42555-201ENSMUST00000199304 1039 ntBASIC15.96■□□□□ 0.15
Trav6-7-dv9A0A075B639 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-7-dv9A0A075B639 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-7-dv9A0A075B639 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-7-dv9A0A075B639 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Trav6-7-dv9A0A075B639 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.96■□□□□ 0.14
Trav6-7-dv9A0A075B639 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.14
Trav6-7-dv9A0A075B639 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Trav6-7-dv9A0A075B639 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-7-dv9A0A075B639 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-7-dv9A0A075B639 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
Trav6-7-dv9A0A075B639 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav6-7-dv9A0A075B639 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-7-dv9A0A075B639 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-7-dv9A0A075B639 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC15.95■□□□□ 0.14
Trav6-7-dv9A0A075B639 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-7-dv9A0A075B639 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-7-dv9A0A075B639 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-7-dv9A0A075B639 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-7-dv9A0A075B639 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Trav6-7-dv9A0A075B639 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-7-dv9A0A075B639 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-7-dv9A0A075B639 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trav6-7-dv9A0A075B639 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-7-dv9A0A075B639 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-7-dv9A0A075B639 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-7-dv9A0A075B639 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-7-dv9A0A075B639 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.94■□□□□ 0.14
Trav6-7-dv9A0A075B639 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-7-dv9A0A075B639 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-7-dv9A0A075B639 Gm6211-202ENSMUST00000167849 925 ntBASIC15.94■□□□□ 0.14
Trav6-7-dv9A0A075B639 Gm26571-201ENSMUST00000181399 666 ntBASIC15.94■□□□□ 0.14
Trav6-7-dv9A0A075B639 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC15.94■□□□□ 0.14
Trav6-7-dv9A0A075B639 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-7-dv9A0A075B639 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-7-dv9A0A075B639 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-7-dv9A0A075B639 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-7-dv9A0A075B639 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-7-dv9A0A075B639 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-7-dv9A0A075B639 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
Trav6-7-dv9A0A075B639 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-7-dv9A0A075B639 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav6-7-dv9A0A075B639 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
Trav6-7-dv9A0A075B639 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-7-dv9A0A075B639 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-7-dv9A0A075B639 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.93■□□□□ 0.14
Trav6-7-dv9A0A075B639 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-7-dv9A0A075B639 Gm8969-201ENSMUST00000199694 526 ntBASIC15.93■□□□□ 0.14
Trav6-7-dv9A0A075B639 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-7-dv9A0A075B639 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-7-dv9A0A075B639 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Trav6-7-dv9A0A075B639 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-7-dv9A0A075B639 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-7-dv9A0A075B639 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-7-dv9A0A075B639 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trav6-7-dv9A0A075B639 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
Trav6-7-dv9A0A075B639 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav6-7-dv9A0A075B639 Gm44832-201ENSMUST00000208849 2303 ntBASIC15.93■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms