Protein–RNA interactions for Protein: A0A075B633

Trav8n-2, T cell receptor alpha variable 8n-2 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8n-2A0A075B633 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
Trav8n-2A0A075B633 Gm12085-201ENSMUST00000119263 940 ntBASIC16.52■□□□□ 0.24
Trav8n-2A0A075B633 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav8n-2A0A075B633 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav8n-2A0A075B633 Mir2861-201ENSMUST00000175539 82 ntBASIC16.52■□□□□ 0.24
Trav8n-2A0A075B633 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.52■□□□□ 0.24
Trav8n-2A0A075B633 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Trav8n-2A0A075B633 Gm45058-201ENSMUST00000205810 766 ntBASIC16.52■□□□□ 0.24
Trav8n-2A0A075B633 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav8n-2A0A075B633 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav8n-2A0A075B633 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav8n-2A0A075B633 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Trav8n-2A0A075B633 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav8n-2A0A075B633 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav8n-2A0A075B633 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav8n-2A0A075B633 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav8n-2A0A075B633 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav8n-2A0A075B633 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8n-2A0A075B633 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Trav8n-2A0A075B633 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8n-2A0A075B633 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trav8n-2A0A075B633 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8n-2A0A075B633 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8n-2A0A075B633 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC16.51■□□□□ 0.23
Trav8n-2A0A075B633 Gm23634-201ENSMUST00000175071 91 ntBASIC16.51■□□□□ 0.23
Trav8n-2A0A075B633 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trav8n-2A0A075B633 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC16.51■□□□□ 0.23
Trav8n-2A0A075B633 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Trav8n-2A0A075B633 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8n-2A0A075B633 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8n-2A0A075B633 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Trav8n-2A0A075B633 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8n-2A0A075B633 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.51■□□□□ 0.23
Trav8n-2A0A075B633 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav8n-2A0A075B633 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trav8n-2A0A075B633 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8n-2A0A075B633 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8n-2A0A075B633 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8n-2A0A075B633 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8n-2A0A075B633 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8n-2A0A075B633 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8n-2A0A075B633 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8n-2A0A075B633 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Trav8n-2A0A075B633 Gm2274-201ENSMUST00000184539 609 ntBASIC16.5■□□□□ 0.23
Trav8n-2A0A075B633 Gm10517-202ENSMUST00000192970 758 ntBASIC16.5■□□□□ 0.23
Trav8n-2A0A075B633 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.5■□□□□ 0.23
Trav8n-2A0A075B633 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trav8n-2A0A075B633 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8n-2A0A075B633 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trav8n-2A0A075B633 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav8n-2A0A075B633 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.5■□□□□ 0.23
Trav8n-2A0A075B633 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav8n-2A0A075B633 AA414768-201ENSMUST00000121924 1257 ntBASIC16.49■□□□□ 0.23
Trav8n-2A0A075B633 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav8n-2A0A075B633 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC16.49■□□□□ 0.23
Trav8n-2A0A075B633 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Trav8n-2A0A075B633 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
Trav8n-2A0A075B633 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.49■□□□□ 0.23
Trav8n-2A0A075B633 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.49■□□□□ 0.23
Trav8n-2A0A075B633 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav8n-2A0A075B633 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav8n-2A0A075B633 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav8n-2A0A075B633 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Trav8n-2A0A075B633 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav8n-2A0A075B633 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav8n-2A0A075B633 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8n-2A0A075B633 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8n-2A0A075B633 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8n-2A0A075B633 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8n-2A0A075B633 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8n-2A0A075B633 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trav8n-2A0A075B633 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8n-2A0A075B633 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8n-2A0A075B633 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8n-2A0A075B633 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8n-2A0A075B633 Mir5130-201ENSMUST00000175160 84 ntBASIC16.48■□□□□ 0.23
Trav8n-2A0A075B633 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC16.48■□□□□ 0.23
Trav8n-2A0A075B633 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC16.48■□□□□ 0.23
Trav8n-2A0A075B633 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.48■□□□□ 0.23
Trav8n-2A0A075B633 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8n-2A0A075B633 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav8n-2A0A075B633 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Trav8n-2A0A075B633 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
Trav8n-2A0A075B633 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8n-2A0A075B633 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8n-2A0A075B633 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav8n-2A0A075B633 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trav8n-2A0A075B633 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8n-2A0A075B633 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8n-2A0A075B633 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8n-2A0A075B633 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trav8n-2A0A075B633 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8n-2A0A075B633 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8n-2A0A075B633 Gm38027-201ENSMUST00000192315 235 ntBASIC16.47■□□□□ 0.23
Trav8n-2A0A075B633 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.47■□□□□ 0.23
Trav8n-2A0A075B633 Gm18032-201ENSMUST00000222541 538 ntBASIC16.47■□□□□ 0.23
Trav8n-2A0A075B633 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.47■□□□□ 0.23
Trav8n-2A0A075B633 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8n-2A0A075B633 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav8n-2A0A075B633 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms