Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Gm9194-201ENSMUST00000220749 1447 ntBASIC13.26□□□□□ -0.29
Trav16d-dv11A0A075B617 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav16d-dv11A0A075B617 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav16d-dv11A0A075B617 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav16d-dv11A0A075B617 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav16d-dv11A0A075B617 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Trav16d-dv11A0A075B617 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Trav16d-dv11A0A075B617 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Trav16d-dv11A0A075B617 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Trav16d-dv11A0A075B617 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav16d-dv11A0A075B617 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav16d-dv11A0A075B617 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav16d-dv11A0A075B617 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC13.25□□□□□ -0.29
Trav16d-dv11A0A075B617 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav16d-dv11A0A075B617 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trav16d-dv11A0A075B617 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav16d-dv11A0A075B617 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav16d-dv11A0A075B617 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Trav16d-dv11A0A075B617 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav16d-dv11A0A075B617 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav16d-dv11A0A075B617 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav16d-dv11A0A075B617 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav16d-dv11A0A075B617 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav16d-dv11A0A075B617 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav16d-dv11A0A075B617 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav16d-dv11A0A075B617 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Trav16d-dv11A0A075B617 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav16d-dv11A0A075B617 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav16d-dv11A0A075B617 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav16d-dv11A0A075B617 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav16d-dv11A0A075B617 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav16d-dv11A0A075B617 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav16d-dv11A0A075B617 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav16d-dv11A0A075B617 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav16d-dv11A0A075B617 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav16d-dv11A0A075B617 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav16d-dv11A0A075B617 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav16d-dv11A0A075B617 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav16d-dv11A0A075B617 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav16d-dv11A0A075B617 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav16d-dv11A0A075B617 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav16d-dv11A0A075B617 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.24□□□□□ -0.29
Trav16d-dv11A0A075B617 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav16d-dv11A0A075B617 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC13.24□□□□□ -0.29
Trav16d-dv11A0A075B617 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav16d-dv11A0A075B617 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav16d-dv11A0A075B617 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Trav16d-dv11A0A075B617 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav16d-dv11A0A075B617 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Trav16d-dv11A0A075B617 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav16d-dv11A0A075B617 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav16d-dv11A0A075B617 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav16d-dv11A0A075B617 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav16d-dv11A0A075B617 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav16d-dv11A0A075B617 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav16d-dv11A0A075B617 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav16d-dv11A0A075B617 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav16d-dv11A0A075B617 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav16d-dv11A0A075B617 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav16d-dv11A0A075B617 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16d-dv11A0A075B617 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav16d-dv11A0A075B617 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16d-dv11A0A075B617 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16d-dv11A0A075B617 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16d-dv11A0A075B617 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16d-dv11A0A075B617 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16d-dv11A0A075B617 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav16d-dv11A0A075B617 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav16d-dv11A0A075B617 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16d-dv11A0A075B617 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16d-dv11A0A075B617 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16d-dv11A0A075B617 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16d-dv11A0A075B617 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16d-dv11A0A075B617 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16d-dv11A0A075B617 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16d-dv11A0A075B617 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav16d-dv11A0A075B617 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Trav16d-dv11A0A075B617 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16d-dv11A0A075B617 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16d-dv11A0A075B617 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16d-dv11A0A075B617 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16d-dv11A0A075B617 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav16d-dv11A0A075B617 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Trav16d-dv11A0A075B617 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16d-dv11A0A075B617 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16d-dv11A0A075B617 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16d-dv11A0A075B617 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16d-dv11A0A075B617 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.22□□□□□ -0.29
Trav16d-dv11A0A075B617 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC13.22□□□□□ -0.29
Trav16d-dv11A0A075B617 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16d-dv11A0A075B617 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16d-dv11A0A075B617 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav16d-dv11A0A075B617 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16d-dv11A0A075B617 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16d-dv11A0A075B617 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16d-dv11A0A075B617 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16d-dv11A0A075B617 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav16d-dv11A0A075B617 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
Trav16d-dv11A0A075B617 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav16d-dv11A0A075B617 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms