Protein–RNA interactions for Protein: A0A075B603

Trav6-6, T cell receptor alpha variable 6-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-6A0A075B603 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-6A0A075B603 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-6A0A075B603 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-6A0A075B603 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-6A0A075B603 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav6-6A0A075B603 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-6A0A075B603 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-6A0A075B603 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-6A0A075B603 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-6A0A075B603 Gm43338-201ENSMUST00000198617 2223 ntBASIC13.43□□□□□ -0.26
Trav6-6A0A075B603 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-6A0A075B603 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-6A0A075B603 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-6A0A075B603 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-6A0A075B603 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-6A0A075B603 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-6A0A075B603 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-6A0A075B603 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-6A0A075B603 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-6A0A075B603 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-6A0A075B603 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav6-6A0A075B603 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav6-6A0A075B603 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav6-6A0A075B603 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-6A0A075B603 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-6A0A075B603 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav6-6A0A075B603 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-6A0A075B603 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav6-6A0A075B603 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-6A0A075B603 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-6A0A075B603 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-6A0A075B603 Gm8969-201ENSMUST00000199694 526 ntBASIC13.42□□□□□ -0.26
Trav6-6A0A075B603 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-6A0A075B603 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-6A0A075B603 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-6A0A075B603 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav6-6A0A075B603 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-6A0A075B603 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-6A0A075B603 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav6-6A0A075B603 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Trav6-6A0A075B603 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav6-6A0A075B603 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-6A0A075B603 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Trav6-6A0A075B603 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-6A0A075B603 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-6A0A075B603 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-6A0A075B603 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-6A0A075B603 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-6A0A075B603 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-6A0A075B603 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Trav6-6A0A075B603 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-6A0A075B603 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-6A0A075B603 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-6A0A075B603 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-6A0A075B603 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-6A0A075B603 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-6A0A075B603 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-6A0A075B603 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav6-6A0A075B603 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-6A0A075B603 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-6A0A075B603 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav6-6A0A075B603 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-6A0A075B603 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-6A0A075B603 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-6A0A075B603 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav6-6A0A075B603 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-6A0A075B603 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-6A0A075B603 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-6A0A075B603 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Trav6-6A0A075B603 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Trav6-6A0A075B603 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-6A0A075B603 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC13.4□□□□□ -0.26
Trav6-6A0A075B603 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-6A0A075B603 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC13.4□□□□□ -0.26
Trav6-6A0A075B603 Gm43173-201ENSMUST00000202246 593 ntBASIC13.4□□□□□ -0.26
Trav6-6A0A075B603 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav6-6A0A075B603 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav6-6A0A075B603 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-6A0A075B603 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-6A0A075B603 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Trav6-6A0A075B603 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Trav6-6A0A075B603 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav6-6A0A075B603 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
Trav6-6A0A075B603 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Trav6-6A0A075B603 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-6A0A075B603 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-6A0A075B603 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-6A0A075B603 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-6A0A075B603 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-6A0A075B603 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-6A0A075B603 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-6A0A075B603 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav6-6A0A075B603 Gm7860-201ENSMUST00000121190 879 ntBASIC13.39□□□□□ -0.27
Trav6-6A0A075B603 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-6A0A075B603 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-6A0A075B603 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-6A0A075B603 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-6A0A075B603 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-6A0A075B603 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav6-6A0A075B603 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms