Protein–RNA interactions for Protein: A0A075B5Z8

Trav6-1, T cell receptor alpha variable 6-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-1A0A075B5Z8 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6-1A0A075B5Z8 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-1A0A075B5Z8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-1A0A075B5Z8 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-1A0A075B5Z8 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-1A0A075B5Z8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-1A0A075B5Z8 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav6-1A0A075B5Z8 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-1A0A075B5Z8 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-1A0A075B5Z8 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-1A0A075B5Z8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-1A0A075B5Z8 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
Trav6-1A0A075B5Z8 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-1A0A075B5Z8 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-1A0A075B5Z8 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-1A0A075B5Z8 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav6-1A0A075B5Z8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC14.49□□□□□ -0.09
Trav6-1A0A075B5Z8 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-1A0A075B5Z8 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6-1A0A075B5Z8 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-1A0A075B5Z8 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-1A0A075B5Z8 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-1A0A075B5Z8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-1A0A075B5Z8 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-1A0A075B5Z8 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-1A0A075B5Z8 Gm13534-201ENSMUST00000121169 513 ntBASIC14.48□□□□□ -0.09
Trav6-1A0A075B5Z8 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Trav6-1A0A075B5Z8 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.48□□□□□ -0.09
Trav6-1A0A075B5Z8 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav6-1A0A075B5Z8 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.48□□□□□ -0.09
Trav6-1A0A075B5Z8 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
Trav6-1A0A075B5Z8 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-1A0A075B5Z8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-1A0A075B5Z8 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-1A0A075B5Z8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-1A0A075B5Z8 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-1A0A075B5Z8 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-1A0A075B5Z8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-1A0A075B5Z8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav6-1A0A075B5Z8 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-1A0A075B5Z8 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6-1A0A075B5Z8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Trav6-1A0A075B5Z8 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav6-1A0A075B5Z8 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav6-1A0A075B5Z8 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-1A0A075B5Z8 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-1A0A075B5Z8 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-1A0A075B5Z8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-1A0A075B5Z8 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-1A0A075B5Z8 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.47□□□□□ -0.09
Trav6-1A0A075B5Z8 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-1A0A075B5Z8 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav6-1A0A075B5Z8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Trav6-1A0A075B5Z8 Gm22325-201ENSMUST00000158904 308 ntBASIC14.47□□□□□ -0.09
Trav6-1A0A075B5Z8 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-1A0A075B5Z8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC14.47□□□□□ -0.09
Trav6-1A0A075B5Z8 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-1A0A075B5Z8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav6-1A0A075B5Z8 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-1A0A075B5Z8 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-1A0A075B5Z8 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-1A0A075B5Z8 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-1A0A075B5Z8 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-1A0A075B5Z8 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-1A0A075B5Z8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-1A0A075B5Z8 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6-1A0A075B5Z8 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-1A0A075B5Z8 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-1A0A075B5Z8 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-1A0A075B5Z8 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-1A0A075B5Z8 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-1A0A075B5Z8 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.46□□□□□ -0.09
Trav6-1A0A075B5Z8 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-1A0A075B5Z8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-1A0A075B5Z8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC14.46□□□□□ -0.09
Trav6-1A0A075B5Z8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-1A0A075B5Z8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav6-1A0A075B5Z8 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-1A0A075B5Z8 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-1A0A075B5Z8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-1A0A075B5Z8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6-1A0A075B5Z8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trav6-1A0A075B5Z8 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6-1A0A075B5Z8 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC14.46□□□□□ -0.1
Trav6-1A0A075B5Z8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
Trav6-1A0A075B5Z8 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6-1A0A075B5Z8 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6-1A0A075B5Z8 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6-1A0A075B5Z8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-1A0A075B5Z8 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-1A0A075B5Z8 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-1A0A075B5Z8 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-1A0A075B5Z8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav6-1A0A075B5Z8 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Trav6-1A0A075B5Z8 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-1A0A075B5Z8 Gm27454-201ENSMUST00000185090 204 ntBASIC14.45□□□□□ -0.1
Trav6-1A0A075B5Z8 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav6-1A0A075B5Z8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6-1A0A075B5Z8 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Trav6-1A0A075B5Z8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms