Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 AC158981.2-201ENSMUST00000227565 1537 ntBASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm25564-201ENSMUST00000104604 132 ntBASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm14375-201ENSMUST00000119490 855 ntBASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm15967-201ENSMUST00000120027 1116 ntBASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm15181-201ENSMUST00000120142 177 ntBASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm14054-201ENSMUST00000120744 704 ntBASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm11925-201ENSMUST00000121375 535 ntBASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm11341-201ENSMUST00000122316 447 ntBASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm16062-201ENSMUST00000151825 771 ntTSL 2 BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm25117-201ENSMUST00000157194 144 ntBASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm24239-201ENSMUST00000157791 255 ntBASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm26162-201ENSMUST00000157793 132 ntBASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm10177-201ENSMUST00000160052 444 ntBASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm18006-201ENSMUST00000177411 662 ntBASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm5947-201ENSMUST00000179156 714 ntBASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm5645-201ENSMUST00000179597 714 ntBASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm26820-201ENSMUST00000180764 1008 ntTSL 5 BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm27348-201ENSMUST00000184511 170 ntBASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Mir6989-201ENSMUST00000184812 65 ntBASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm28918-201ENSMUST00000188822 699 ntBASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm29282-201ENSMUST00000190720 473 ntTSL 5 BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm37177-201ENSMUST00000193768 417 ntBASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 BC049739-201ENSMUST00000202626 660 ntBASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm44225-201ENSMUST00000203582 186 ntBASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm45127-201ENSMUST00000205984 1015 ntBASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 CT009748.2-201ENSMUST00000213828 1082 ntTSL 5 BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm18863-201ENSMUST00000217004 1299 ntBASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm3266-201ENSMUST00000217832 591 ntBASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 AC160114.2-201ENSMUST00000223021 300 ntBASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 CT025552.1-201ENSMUST00000224561 521 ntBASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 AC113031.1-201ENSMUST00000227400 432 ntBASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Tas2r119-201ENSMUST00000057633 1006 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Olfr684-201ENSMUST00000060893 939 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Olfr845-201ENSMUST00000071259 942 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm28320-201ENSMUST00000187777 2273 ntBASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Tmem45a2-203ENSMUST00000227043 1447 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Olfr1391-202ENSMUST00000215671 3235 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm2245-201ENSMUST00000160698 3376 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Gm15457-201ENSMUST00000129513 3990 ntTSL 2 BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 1810046K07Rik-201ENSMUST00000039959 1318 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Chmp1b1Q99LU0 Usp29-204ENSMUST00000200535 7540 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 AC156025.2-201ENSMUST00000225907 1533 ntBASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 AC155710.1-201ENSMUST00000219913 1353 ntBASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Nmrk1-201ENSMUST00000042392 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Gm26984-201ENSMUST00000182345 3510 ntBASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Akap4-203ENSMUST00000115751 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Olfr357-202ENSMUST00000213218 5367 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Gm12307-201ENSMUST00000120581 590 ntBASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Gm12140-201ENSMUST00000121214 544 ntBASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Rps29-ps-201ENSMUST00000122083 172 ntBASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Gm21990-201ENSMUST00000124692 383 ntBASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Gm27005-201ENSMUST00000182783 921 ntBASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Gm37475-201ENSMUST00000193107 1015 ntBASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Gm4332-201ENSMUST00000196114 346 ntBASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Gm32158-201ENSMUST00000200135 404 ntBASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Gm43762-201ENSMUST00000201521 295 ntBASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Gm19212-201ENSMUST00000216642 862 ntBASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 AC153557.1-201ENSMUST00000217697 403 ntBASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 AC134917.2-201ENSMUST00000223354 124 ntBASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 AC122290.1-201ENSMUST00000225631 1078 ntBASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 AC129537.1-201ENSMUST00000226596 1228 ntBASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 AC113125.2-201ENSMUST00000226837 362 ntBASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Skint10-202ENSMUST00000068851 493 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Gm22300-201ENSMUST00000082661 126 ntBASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Gm3608-201ENSMUST00000086725 2858 ntBASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 4933402E13Rik-202ENSMUST00000178085 1931 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Chmp1b1Q99LU0 Gm43788-201ENSMUST00000201539 2417 ntBASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms