Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 Ms4a12-201ENSMUST00000186228 792 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Cstf1Q99LC2 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cstf1Q99LC2 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cstf1Q99LC2 Gm21812-202ENSMUST00000188908 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cstf1Q99LC2 Gm20932-201ENSMUST00000189115 694 ntBASIC6.19□□□□□ -1.42
Cstf1Q99LC2 Gm29007-201ENSMUST00000190633 679 ntTSL 5 BASIC6.19□□□□□ -1.42
Cstf1Q99LC2 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cstf1Q99LC2 Igkv4-56-201ENSMUST00000198436 349 ntBASIC6.19□□□□□ -1.42
Cstf1Q99LC2 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.19□□□□□ -1.42
Cstf1Q99LC2 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC6.19□□□□□ -1.42
Cstf1Q99LC2 Gm45874-201ENSMUST00000212423 346 ntBASIC6.19□□□□□ -1.42
Cstf1Q99LC2 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC6.19□□□□□ -1.42
Cstf1Q99LC2 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.19□□□□□ -1.42
Cstf1Q99LC2 Gm18405-201ENSMUST00000220743 511 ntBASIC6.19□□□□□ -1.42
Cstf1Q99LC2 Gm34081-201ENSMUST00000221332 690 ntTSL 5 BASIC6.19□□□□□ -1.42
Cstf1Q99LC2 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cstf1Q99LC2 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cstf1Q99LC2 Olfr424-201ENSMUST00000053941 948 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Cstf1Q99LC2 4930578G10Rik-201ENSMUST00000068158 614 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Cstf1Q99LC2 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Cstf1Q99LC2 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Cstf1Q99LC2 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Cstf1Q99LC2 Mir143-201ENSMUST00000083511 63 ntBASIC6.19□□□□□ -1.42
Cstf1Q99LC2 Mir218-2-201ENSMUST00000083649 110 ntBASIC6.19□□□□□ -1.42
Cstf1Q99LC2 Gm21284-201ENSMUST00000205532 3736 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cstf1Q99LC2 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC6.19□□□□□ -1.42
Cstf1Q99LC2 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cstf1Q99LC2 AC156636.2-201ENSMUST00000218845 4557 ntBASIC6.19□□□□□ -1.42
Cstf1Q99LC2 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC6.19□□□□□ -1.42
Cstf1Q99LC2 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
Cstf1Q99LC2 Ptprd-213ENSMUST00000173376 4793 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cstf1Q99LC2 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cstf1Q99LC2 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Cstf1Q99LC2 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
Cstf1Q99LC2 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Cstf1Q99LC2 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Gm44889-203ENSMUST00000208346 1589 ntTSL 5 BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.18□□□□□ -1.42
Cstf1Q99LC2 AL450321.1-201ENSMUST00000220600 3550 ntBASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Vmn1r184-203ENSMUST00000227232 8472 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Tank-205ENSMUST00000112502 2016 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Tank-201ENSMUST00000078074 2018 ntAPPRIS P3 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Gm37525-201ENSMUST00000193499 2871 ntBASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Nsd1-207ENSMUST00000224973 9905 ntBASIC6.18□□□□□ -1.42
Cstf1Q99LC2 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Mir466f-4-201ENSMUST00000116930 121 ntBASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Gm14550-201ENSMUST00000117918 407 ntBASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Gimap4-205ENSMUST00000121957 775 ntTSL 2 BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Klra8-201ENSMUST00000014476 1178 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Gm25603-201ENSMUST00000158361 105 ntBASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Gm1972-201ENSMUST00000181606 964 ntBASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Gm27039-201ENSMUST00000182438 962 ntBASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Gm28492-201ENSMUST00000190899 1019 ntBASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Gm18348-201ENSMUST00000191227 820 ntBASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Gm43054-201ENSMUST00000199495 884 ntBASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Gm43456-201ENSMUST00000202519 457 ntBASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Cyp2b27-ps-201ENSMUST00000205582 1279 ntBASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Gm29791-201ENSMUST00000207144 380 ntTSL 3 BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 AC117245.2-201ENSMUST00000216943 570 ntTSL 5 BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 AC154452.1-201ENSMUST00000225819 241 ntBASIC6.18□□□□□ -1.42
Cstf1Q99LC2 AC122251.2-201ENSMUST00000227341 603 ntBASIC6.18□□□□□ -1.42
Cstf1Q99LC2 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Mir331-201ENSMUST00000083673 96 ntBASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Frem2-201ENSMUST00000091137 12348 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 C030015A19Rik-201ENSMUST00000203368 2551 ntBASIC6.18□□□□□ -1.42
Cstf1Q99LC2 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Dnah17-202ENSMUST00000084803 14889 ntAPPRIS P2 TSL 5 BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC6.18□□□□□ -1.42
Cstf1Q99LC2 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
Cstf1Q99LC2 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.18□□□□□ -1.42
Cstf1Q99LC2 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC6.17□□□□□ -1.42
Cstf1Q99LC2 Crtam-203ENSMUST00000180872 4443 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cstf1Q99LC2 AC116950.1-201ENSMUST00000226322 3250 ntBASIC6.17□□□□□ -1.42
Cstf1Q99LC2 Gm7048-201ENSMUST00000199395 1891 ntBASIC6.17□□□□□ -1.42
Cstf1Q99LC2 Il7r-204ENSMUST00000228782 3516 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
Cstf1Q99LC2 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.17□□□□□ -1.42
Cstf1Q99LC2 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC6.17□□□□□ -1.42
Cstf1Q99LC2 Ect2-202ENSMUST00000108298 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cstf1Q99LC2 Otub2-205ENSMUST00000179684 2890 ntTSL 5 BASIC6.17□□□□□ -1.42
Cstf1Q99LC2 B230303O12Rik-201ENSMUST00000199119 3645 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
Cstf1Q99LC2 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Cstf1Q99LC2 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
Cstf1Q99LC2 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
Cstf1Q99LC2 Hspa13-202ENSMUST00000114244 2674 ntTSL 5 BASIC6.17□□□□□ -1.42
Cstf1Q99LC2 Aox3-201ENSMUST00000040999 4606 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms