Protein–RNA interactions for Protein: Q8CDN8

Ccdc38, Coiled-coil domain-containing protein 38, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38Q8CDN8 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 Ap5m1-208ENSMUST00000228238 3514 ntBASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 Pole2-202ENSMUST00000221411 1641 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 Gm14659-201ENSMUST00000117667 843 ntBASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 Gm12583-201ENSMUST00000120677 853 ntBASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 Gm2986-201ENSMUST00000121603 382 ntBASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 1700057H15Rik-201ENSMUST00000127913 595 ntTSL 3 BASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 Gm8550-201ENSMUST00000161621 653 ntBASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 Gm6541-201ENSMUST00000165542 561 ntBASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 Gm37871-201ENSMUST00000194973 688 ntBASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 Gm43048-201ENSMUST00000196101 388 ntBASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 Gm40348-201ENSMUST00000199648 452 ntTSL 3 BASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 Gm36378-201ENSMUST00000201709 388 ntBASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 Gm19764-201ENSMUST00000203630 649 ntBASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 Gm45345-201ENSMUST00000211427 555 ntTSL 2 BASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 AC158521.1-202ENSMUST00000224352 645 ntBASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Ccdc38Q8CDN8 Yae1d1-201ENSMUST00000099735 8744 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 AC163731.1-201ENSMUST00000225696 3118 ntBASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Gm25346-201ENSMUST00000104509 128 ntBASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Gm14510-201ENSMUST00000116165 1092 ntBASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Gm11445-201ENSMUST00000119101 532 ntBASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Vmn1r-ps111-201ENSMUST00000121014 997 ntBASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Gm5843-201ENSMUST00000121631 476 ntBASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Vmn1r208-201ENSMUST00000124841 927 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Gm25904-201ENSMUST00000158491 143 ntBASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Gm17121-201ENSMUST00000170414 847 ntBASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Gm18953-201ENSMUST00000175694 300 ntBASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Gm17222-201ENSMUST00000180135 847 ntBASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Gm27998-201ENSMUST00000184902 361 ntBASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Matr3-215ENSMUST00000190121 2638 ntTSL 5 BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Gm21048-201ENSMUST00000202470 1166 ntBASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Gm33680-203ENSMUST00000219610 4117 ntTSL 3 BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 AC124601.1-201ENSMUST00000220531 135 ntBASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 CT010431.1-201ENSMUST00000221249 1080 ntBASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 AC165260.3-201ENSMUST00000225101 665 ntBASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Clca3a1-202ENSMUST00000059091 3524 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Naip5-201ENSMUST00000049789 5204 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Hnmt-201ENSMUST00000051416 1656 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Gm38277-201ENSMUST00000195172 1367 ntBASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Kif20b-203ENSMUST00000223907 5423 ntAPPRIS ALT2 BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Ccdc38Q8CDN8 Vmn2r6-201ENSMUST00000165012 2484 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
Ccdc38Q8CDN8 Vmn2r7-203ENSMUST00000168072 2484 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
Ccdc38Q8CDN8 Trmt10a-201ENSMUST00000040321 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc38Q8CDN8 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc38Q8CDN8 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
Ccdc38Q8CDN8 Gm37953-201ENSMUST00000195293 1884 ntBASIC6.79□□□□□ -1.32
Ccdc38Q8CDN8 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc38Q8CDN8 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Ccdc38Q8CDN8 Gm23768-201ENSMUST00000104440 131 ntBASIC6.79□□□□□ -1.32
Ccdc38Q8CDN8 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC6.79□□□□□ -1.32
Ccdc38Q8CDN8 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.79□□□□□ -1.32
Ccdc38Q8CDN8 Gm12985-201ENSMUST00000118376 183 ntBASIC6.79□□□□□ -1.32
Ccdc38Q8CDN8 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 91.8 ms