Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Gm6602-201ENSMUST00000198910 1927 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Nsun6-208ENSMUST00000195749 3149 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Gm37342-201ENSMUST00000194588 4965 ntBASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Gm3636-201ENSMUST00000100904 519 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Slc4a10-202ENSMUST00000102735 5482 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Gm3173-201ENSMUST00000112776 519 ntAPPRIS P5 TSL 5 BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Gm15818-201ENSMUST00000134692 656 ntTSL 3 BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Gm24295-201ENSMUST00000158298 131 ntBASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Gm3173-202ENSMUST00000164603 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Gm3264-201ENSMUST00000166410 519 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Gm8108-201ENSMUST00000167397 519 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Gm3005-201ENSMUST00000178060 444 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Gm3488-201ENSMUST00000178220 519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Gm3317-201ENSMUST00000179659 519 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Gm29376-201ENSMUST00000189357 835 ntBASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Gm29467-202ENSMUST00000189669 935 ntTSL 5 BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Gm29633-207ENSMUST00000190523 737 ntTSL 5 BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Gm43258-201ENSMUST00000200312 1950 ntBASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Grik1-210ENSMUST00000228034 2708 ntBASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Gm20121-201ENSMUST00000198547 1594 ntBASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 AC136019.1-201ENSMUST00000226503 1412 ntBASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Ints9-201ENSMUST00000043914 2674 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Olfr341-201ENSMUST00000100154 942 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Igkv8-26-201ENSMUST00000103382 371 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 S100a9-202ENSMUST00000117167 519 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Olfr334-ps1-201ENSMUST00000121252 892 ntBASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Gm37689-201ENSMUST00000193139 275 ntBASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Gm44053-201ENSMUST00000203364 929 ntBASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Gm3257-201ENSMUST00000207217 675 ntBASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 AC124445.1-201ENSMUST00000218613 452 ntBASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 AC134254.2-201ENSMUST00000221262 170 ntBASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Zfp429-203ENSMUST00000224684 524 ntBASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Olfr491-201ENSMUST00000053179 933 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 S100a9-201ENSMUST00000069960 512 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Col6a6Q8C6K9 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 AC115289.2-201ENSMUST00000223836 2803 ntBASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Oxr1-207ENSMUST00000179393 4498 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Gm11516-201ENSMUST00000118450 1582 ntBASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Agl-208ENSMUST00000162792 6978 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Olfr398-202ENSMUST00000117510 5135 ntAPPRIS P1 TSL 3 BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Rfc1-201ENSMUST00000172732 4699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Gm8501-201ENSMUST00000117684 432 ntBASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Gm14755-201ENSMUST00000118037 384 ntBASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Gm14175-201ENSMUST00000119835 241 ntBASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Gm11545-201ENSMUST00000146507 375 ntBASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Gm17078-201ENSMUST00000167617 668 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Mir6417-201ENSMUST00000183815 116 ntBASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Gm28502-201ENSMUST00000189781 476 ntTSL 2 BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Gm43554-201ENSMUST00000199987 186 ntBASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Gm4548-201ENSMUST00000208487 509 ntBASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 AC163721.1-201ENSMUST00000222669 394 ntTSL 3 BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Gm5229-201ENSMUST00000039375 354 ntBASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Rapgef4-203ENSMUST00000102698 2982 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 2900079G21Rik-202ENSMUST00000144424 2944 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 AC122357.3-201ENSMUST00000221260 2293 ntBASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC5.42□□□□□ -1.54
Col6a6Q8C6K9 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 93 ms