Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Clcn1Q64347 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Clcn1Q64347 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clcn1Q64347 Zkscan7-201ENSMUST00000063980 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clcn1Q64347 Cyp2c66-201ENSMUST00000087234 1630 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clcn1Q64347 Bdnf-203ENSMUST00000111043 3839 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clcn1Q64347 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Clcn1Q64347 Iars-206ENSMUST00000165316 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clcn1Q64347 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clcn1Q64347 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC9.2□□□□□ -0.94
Clcn1Q64347 Atp2b4-203ENSMUST00000125659 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clcn1Q64347 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Clcn1Q64347 Efcab7-201ENSMUST00000097959 1713 ntAPPRIS P1 TSL 5 BASIC9.2□□□□□ -0.94
Clcn1Q64347 Siae-204ENSMUST00000215474 4947 ntAPPRIS P2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clcn1Q64347 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC9.2□□□□□ -0.94
Clcn1Q64347 Slc43a2-201ENSMUST00000042561 6891 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clcn1Q64347 Pum1-205ENSMUST00000105992 5058 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Clcn1Q64347 Mir290a-201ENSMUST00000104627 83 ntBASIC9.2□□□□□ -0.94
Clcn1Q64347 Gm15175-201ENSMUST00000117629 132 ntBASIC9.2□□□□□ -0.94
Clcn1Q64347 Gm13640-201ENSMUST00000118445 264 ntBASIC9.2□□□□□ -0.94
Clcn1Q64347 Gm12734-201ENSMUST00000120228 948 ntBASIC9.2□□□□□ -0.94
Clcn1Q64347 Gm12881-201ENSMUST00000121191 203 ntBASIC9.2□□□□□ -0.94
Clcn1Q64347 Gm16412-201ENSMUST00000121602 273 ntBASIC9.2□□□□□ -0.94
Clcn1Q64347 Gm2709-201ENSMUST00000142979 350 ntBASIC9.2□□□□□ -0.94
Clcn1Q64347 Gm2892-201ENSMUST00000145537 711 ntBASIC9.2□□□□□ -0.94
Clcn1Q64347 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC9.2□□□□□ -0.94
Clcn1Q64347 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clcn1Q64347 Gm16298-201ENSMUST00000161107 420 ntBASIC9.2□□□□□ -0.94
Clcn1Q64347 Gm10177-202ENSMUST00000161698 207 ntBASIC9.2□□□□□ -0.94
Clcn1Q64347 Gm7346-201ENSMUST00000169661 476 ntBASIC9.2□□□□□ -0.94
Clcn1Q64347 Gm24824-201ENSMUST00000175097 78 ntBASIC9.2□□□□□ -0.94
Clcn1Q64347 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Clcn1Q64347 Gm26784-201ENSMUST00000181666 410 ntBASIC9.2□□□□□ -0.94
Clcn1Q64347 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC9.2□□□□□ -0.94
Clcn1Q64347 Gm28343-201ENSMUST00000185386 112 ntBASIC9.2□□□□□ -0.94
Clcn1Q64347 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC9.2□□□□□ -0.94
Clcn1Q64347 Gm8367-201ENSMUST00000186145 887 ntBASIC9.2□□□□□ -0.94
Clcn1Q64347 Gm20268-201ENSMUST00000187932 845 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Clcn1Q64347 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC9.2□□□□□ -0.94
Clcn1Q64347 Gm44449-201ENSMUST00000203610 153 ntBASIC9.2□□□□□ -0.94
Clcn1Q64347 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Clcn1Q64347 Gm18863-201ENSMUST00000217004 1299 ntBASIC9.2□□□□□ -0.94
Clcn1Q64347 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC9.2□□□□□ -0.94
Clcn1Q64347 AC166323.1-201ENSMUST00000217756 367 ntBASIC9.2□□□□□ -0.94
Clcn1Q64347 AC165146.1-201ENSMUST00000223777 900 ntBASIC9.2□□□□□ -0.94
Clcn1Q64347 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Clcn1Q64347 Gm10282-201ENSMUST00000075602 1151 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Clcn1Q64347 Defb26-201ENSMUST00000099205 561 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clcn1Q64347 Myt1-203ENSMUST00000108757 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clcn1Q64347 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clcn1Q64347 Gm18305-201ENSMUST00000216532 2128 ntBASIC9.2□□□□□ -0.94
Clcn1Q64347 Srcap-207ENSMUST00000187040 10654 ntAPPRIS P2 TSL 5 BASIC9.2□□□□□ -0.94
Clcn1Q64347 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clcn1Q64347 Cacna1e-201ENSMUST00000004214 12697 ntTSL 5 BASIC9.2□□□□□ -0.94
Clcn1Q64347 Ttll4-202ENSMUST00000113678 3762 ntTSL 5 BASIC9.2□□□□□ -0.94
Clcn1Q64347 Slc12a1-201ENSMUST00000028630 4645 ntAPPRIS P5 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clcn1Q64347 Gm17101-201ENSMUST00000169520 1588 ntBASIC9.2□□□□□ -0.94
Clcn1Q64347 Gm37283-201ENSMUST00000193111 1571 ntBASIC9.2□□□□□ -0.94
Clcn1Q64347 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC9.2□□□□□ -0.94
Clcn1Q64347 Gm46430-206ENSMUST00000222064 1647 ntTSL 3 BASIC9.2□□□□□ -0.94
Clcn1Q64347 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC9.2□□□□□ -0.94
Clcn1Q64347 Zeb2-213ENSMUST00000176732 1762 ntTSL 5 BASIC9.19□□□□□ -0.94
Clcn1Q64347 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
Clcn1Q64347 Olfr731-204ENSMUST00000214388 5438 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Clcn1Q64347 Mstn-201ENSMUST00000027269 2705 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Clcn1Q64347 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Clcn1Q64347 Plp1-201ENSMUST00000033800 4699 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Clcn1Q64347 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Clcn1Q64347 Itgae-201ENSMUST00000006101 3845 ntAPPRIS P4 TSL 1 (best) BASIC9.19□□□□□ -0.94
Clcn1Q64347 Mettl16-205ENSMUST00000141755 12584 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Clcn1Q64347 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Clcn1Q64347 Vmn1r51-213ENSMUST00000228880 4353 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Clcn1Q64347 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC9.19□□□□□ -0.94
Clcn1Q64347 Grem2-201ENSMUST00000055294 3745 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Clcn1Q64347 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Clcn1Q64347 Trbv5-201ENSMUST00000103266 368 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Clcn1Q64347 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC9.19□□□□□ -0.94
Clcn1Q64347 Gm15021-201ENSMUST00000117832 742 ntBASIC9.19□□□□□ -0.94
Clcn1Q64347 Gm11889-201ENSMUST00000118402 1079 ntBASIC9.19□□□□□ -0.94
Clcn1Q64347 Vmn1r-ps1-201ENSMUST00000118738 573 ntBASIC9.19□□□□□ -0.94
Clcn1Q64347 Gm12959-201ENSMUST00000119396 403 ntBASIC9.19□□□□□ -0.94
Clcn1Q64347 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC9.19□□□□□ -0.94
Clcn1Q64347 Gm9439-201ENSMUST00000119554 973 ntBASIC9.19□□□□□ -0.94
Clcn1Q64347 Gm11512-201ENSMUST00000119669 663 ntBASIC9.19□□□□□ -0.94
Clcn1Q64347 Gm8722-201ENSMUST00000121466 769 ntBASIC9.19□□□□□ -0.94
Clcn1Q64347 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC9.19□□□□□ -0.94
Clcn1Q64347 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Clcn1Q64347 Gm3160-201ENSMUST00000128343 607 ntBASIC9.19□□□□□ -0.94
Clcn1Q64347 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC9.19□□□□□ -0.94
Clcn1Q64347 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC9.19□□□□□ -0.94
Clcn1Q64347 Gm10364-202ENSMUST00000153034 1001 ntBASIC9.19□□□□□ -0.94
Clcn1Q64347 Gm12971-201ENSMUST00000154720 511 ntTSL 5 BASIC9.19□□□□□ -0.94
Clcn1Q64347 Gm25981-201ENSMUST00000157921 295 ntBASIC9.19□□□□□ -0.94
Clcn1Q64347 Vmn1r1-201ENSMUST00000169123 921 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Clcn1Q64347 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC9.19□□□□□ -0.94
Clcn1Q64347 Gm8183-201ENSMUST00000183134 980 ntBASIC9.19□□□□□ -0.94
Clcn1Q64347 Gm10136-201ENSMUST00000183196 435 ntBASIC9.19□□□□□ -0.94
Clcn1Q64347 Gm27156-201ENSMUST00000184589 754 ntBASIC9.19□□□□□ -0.94
Clcn1Q64347 Gm29412-201ENSMUST00000185869 696 ntBASIC9.19□□□□□ -0.94
Clcn1Q64347 Gm28625-201ENSMUST00000188309 205 ntBASIC9.19□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 66.8 ms