Protein–RNA interactions for Protein: Q4FZC9

Syne3, Nesprin-3, mousemouse

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne3Q4FZC9 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Syne3Q4FZC9 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.76□□□□□ -1.33
Syne3Q4FZC9 CT030181.1-201ENSMUST00000089534 3549 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Syne3Q4FZC9 Gm20300-201ENSMUST00000214634 3440 ntBASIC6.76□□□□□ -1.33
Syne3Q4FZC9 Gm4924-203ENSMUST00000210381 3330 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
Syne3Q4FZC9 Tceal1-201ENSMUST00000055104 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Syne3Q4FZC9 Adam4-201ENSMUST00000085319 2504 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
Syne3Q4FZC9 Vmn2r-ps100-201ENSMUST00000221238 1702 ntBASIC6.76□□□□□ -1.33
Syne3Q4FZC9 Cfhr2-201ENSMUST00000094489 1609 ntAPPRIS P2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Syne3Q4FZC9 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Vmn2r73-201ENSMUST00000077478 2556 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Slco1a6-201ENSMUST00000111827 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Gm15789-201ENSMUST00000118992 1359 ntBASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Vmn1r77-202ENSMUST00000226525 8252 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Gm13768-201ENSMUST00000116469 929 ntBASIC6.75□□□□□ -1.33
Syne3Q4FZC9 1110059G10Rik-202ENSMUST00000118422 723 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Gm11920-201ENSMUST00000118491 563 ntBASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Gm14900-201ENSMUST00000120304 733 ntBASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Gm15473-201ENSMUST00000140746 1179 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Fam229b-209ENSMUST00000149949 736 ntAPPRIS P1 TSL 3 BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 4930445N08Rik-201ENSMUST00000156925 313 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Gm25487-201ENSMUST00000158725 125 ntBASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Gm23777-201ENSMUST00000158994 259 ntBASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Vmn2r-ps86-201ENSMUST00000174812 871 ntBASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Gm27167-201ENSMUST00000183752 511 ntTSL 3 BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Gm37213-201ENSMUST00000193077 586 ntBASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Gm5050-201ENSMUST00000197164 775 ntBASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Gm5853-201ENSMUST00000197183 632 ntBASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Gm43098-201ENSMUST00000199989 1297 ntBASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Gm17834-201ENSMUST00000204322 891 ntBASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Gm4548-201ENSMUST00000208487 509 ntBASIC6.75□□□□□ -1.33
Syne3Q4FZC9 AC122905.1-201ENSMUST00000218181 456 ntTSL 5 BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Gm10037-203ENSMUST00000221620 636 ntAPPRIS P5 TSL 3 BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 CT009527.2-201ENSMUST00000225386 606 ntBASIC6.75□□□□□ -1.33
Syne3Q4FZC9 AC123665.3-201ENSMUST00000228735 1216 ntBASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 n-R5s36-201ENSMUST00000082998 119 ntBASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Mgam2-ps-201ENSMUST00000195870 3745 ntBASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Slc9a4-201ENSMUST00000027233 3962 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Trpm3-204ENSMUST00000099564 3653 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Pcdh15-203ENSMUST00000105424 6932 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Pcdh15-202ENSMUST00000092420 6917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 AC098728.1-202ENSMUST00000226656 2198 ntBASIC6.75□□□□□ -1.33
Syne3Q4FZC9 AC164297.2-201ENSMUST00000224388 1508 ntBASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Syne3Q4FZC9 Gm18422-202ENSMUST00000203798 2214 ntBASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Olfr1199-202ENSMUST00000124021 2967 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Gm25509-201ENSMUST00000116985 106 ntBASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Gm12653-201ENSMUST00000117778 561 ntBASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Gm13604-201ENSMUST00000119332 482 ntBASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Gm13338-201ENSMUST00000120235 361 ntBASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Gm15750-201ENSMUST00000120970 616 ntBASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Gm7494-201ENSMUST00000121248 441 ntBASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Gm11697-201ENSMUST00000149226 525 ntTSL 2 BASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Gm15775-201ENSMUST00000159796 538 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Gm23968-201ENSMUST00000175047 125 ntBASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Gm24155-201ENSMUST00000175259 110 ntBASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Mir6367-201ENSMUST00000183385 102 ntBASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Lemd1-209ENSMUST00000191418 726 ntAPPRIS ALT2 TSL 2 BASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Gm38201-201ENSMUST00000192143 387 ntBASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Gm8454-201ENSMUST00000196980 811 ntBASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Gm43895-201ENSMUST00000203219 855 ntBASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Gm44226-201ENSMUST00000205203 1195 ntTSL 5 BASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Gm44738-201ENSMUST00000206393 371 ntTSL 2 BASIC6.74□□□□□ -1.33
Syne3Q4FZC9 Gm41231-201ENSMUST00000211525 449 ntTSL 5 BASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms