Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Tpo-203ENSMUST00000155263 664 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm22820-201ENSMUST00000157205 329 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm24551-201ENSMUST00000158645 92 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm21858-201ENSMUST00000177834 498 ntTSL 5 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm1553-201ENSMUST00000177934 658 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm21877-201ENSMUST00000185640 694 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm29141-201ENSMUST00000190357 882 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm44342-201ENSMUST00000196874 129 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Mir703-201ENSMUST00000197105 109 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm44383-201ENSMUST00000198940 129 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm43089-201ENSMUST00000199162 275 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm7554-201ENSMUST00000202282 574 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm44181-201ENSMUST00000203106 483 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm44162-201ENSMUST00000203543 544 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm36696-201ENSMUST00000205418 438 ntTSL 2 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Klk1b12-ps-201ENSMUST00000206650 751 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm45279-201ENSMUST00000210315 391 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 AL929285.1-201ENSMUST00000215522 229 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 AC115793.1-201ENSMUST00000216605 215 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm17849-201ENSMUST00000219788 853 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm19073-201ENSMUST00000219978 555 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 1700024I08Rik-202ENSMUST00000222074 407 ntTSL 5 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 CT010453.2-201ENSMUST00000227005 483 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 AC116319.2-201ENSMUST00000228159 984 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Klrd1-201ENSMUST00000032268 586 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Ssxb1-201ENSMUST00000037297 875 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Desi2-202ENSMUST00000069568 1193 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Vmn1r30-201ENSMUST00000078890 1053 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm21731-201ENSMUST00000079524 489 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Olfr1312-201ENSMUST00000099600 954 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Ppargc1a-203ENSMUST00000132734 6464 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Vmn2r-ps159-201ENSMUST00000074107 2716 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm45117-201ENSMUST00000207250 1774 ntBASIC6.28□□□□□ -1.4
Usp39Q3TIX9 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Ogdh-201ENSMUST00000003461 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Srsy-201ENSMUST00000179900 1618 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Kidins220-201ENSMUST00000066652 7409 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm29274-202ENSMUST00000188814 1498 ntTSL 5 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Usp39Q3TIX9 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Gm38077-201ENSMUST00000193657 3245 ntBASIC6.27□□□□□ -1.41
Usp39Q3TIX9 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Usp39Q3TIX9 4930503L19Rik-204ENSMUST00000212155 1585 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC6.27□□□□□ -1.41
Usp39Q3TIX9 CT009757.4-201ENSMUST00000221520 2541 ntBASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Nxpe2-201ENSMUST00000034527 3366 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Gm3476-202ENSMUST00000167913 1759 ntAPPRIS P5 TSL 5 BASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Mttp-201ENSMUST00000029805 3963 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Gm24173-201ENSMUST00000104130 128 ntBASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Gm12468-201ENSMUST00000116189 404 ntBASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Gm14513-201ENSMUST00000117403 123 ntBASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Gm13141-201ENSMUST00000117417 456 ntBASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Gm13400-201ENSMUST00000117436 380 ntBASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Gm15696-201ENSMUST00000121730 445 ntBASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Gm12540-201ENSMUST00000121938 319 ntBASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Lrrc72-202ENSMUST00000122115 934 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Gm2200-201ENSMUST00000124814 764 ntTSL 3 BASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Gm2117-201ENSMUST00000130478 764 ntTSL 3 BASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Gm2101-202ENSMUST00000131997 764 ntTSL 3 BASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Gm2165-203ENSMUST00000137981 764 ntTSL 3 BASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Tnfsf13os-201ENSMUST00000140371 816 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Gm3669-204ENSMUST00000140946 764 ntTSL 3 BASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Gm25057-201ENSMUST00000157366 88 ntBASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Gm10177-201ENSMUST00000160052 444 ntBASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Vmn1r-ps141-201ENSMUST00000176293 753 ntBASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Gm10136-201ENSMUST00000183196 435 ntBASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Mir6367-201ENSMUST00000183385 102 ntBASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Gm27153-201ENSMUST00000184492 407 ntTSL 2 BASIC6.27□□□□□ -1.41
Usp39Q3TIX9 1810053B23Rik-202ENSMUST00000185364 590 ntTSL 3 BASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Gm17895-201ENSMUST00000194028 874 ntBASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Gm37850-201ENSMUST00000194573 549 ntTSL 5 BASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Gm7452-201ENSMUST00000200764 788 ntBASIC6.27□□□□□ -1.41
Usp39Q3TIX9 Gm42857-201ENSMUST00000200823 339 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms