Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm37375-201ENSMUST00000193859 387 ntBASIC5.6□□□□□ -1.51
Scn1bP97952 Gm37838-201ENSMUST00000194464 312 ntBASIC5.6□□□□□ -1.51
Scn1bP97952 Gm37385-201ENSMUST00000195223 387 ntBASIC5.6□□□□□ -1.51
Scn1bP97952 Gm43391-203ENSMUST00000198110 1001 ntTSL 5 BASIC5.6□□□□□ -1.51
Scn1bP97952 Gm43089-201ENSMUST00000199162 275 ntBASIC5.6□□□□□ -1.51
Scn1bP97952 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Scn1bP97952 Gm43798-201ENSMUST00000202056 394 ntBASIC5.6□□□□□ -1.51
Scn1bP97952 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Scn1bP97952 Gm44112-201ENSMUST00000204787 372 ntBASIC5.6□□□□□ -1.51
Scn1bP97952 Gm4032-201ENSMUST00000210886 487 ntBASIC5.6□□□□□ -1.51
Scn1bP97952 AC134606.1-201ENSMUST00000216324 721 ntTSL 3 BASIC5.6□□□□□ -1.51
Scn1bP97952 AC164550.1-201ENSMUST00000217821 1066 ntBASIC5.6□□□□□ -1.51
Scn1bP97952 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC5.6□□□□□ -1.51
Scn1bP97952 Gm19095-201ENSMUST00000220533 730 ntBASIC5.6□□□□□ -1.51
Scn1bP97952 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC5.6□□□□□ -1.51
Scn1bP97952 AC133598.4-201ENSMUST00000224577 454 ntBASIC5.6□□□□□ -1.51
Scn1bP97952 AC154361.1-201ENSMUST00000225694 745 ntBASIC5.6□□□□□ -1.51
Scn1bP97952 AC151902.1-201ENSMUST00000227800 375 ntBASIC5.6□□□□□ -1.51
Scn1bP97952 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scn1bP97952 Samt3-201ENSMUST00000047945 1048 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scn1bP97952 A730045E13Rik-201ENSMUST00000066740 854 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Scn1bP97952 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scn1bP97952 Olfr961-201ENSMUST00000076548 949 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Scn1bP97952 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Scn1bP97952 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
Scn1bP97952 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scn1bP97952 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Scn1bP97952 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.6□□□□□ -1.51
Scn1bP97952 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scn1bP97952 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scn1bP97952 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC5.6□□□□□ -1.51
Scn1bP97952 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.6□□□□□ -1.51
Scn1bP97952 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scn1bP97952 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
Scn1bP97952 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Scn1bP97952 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Scn1bP97952 Gm43637-201ENSMUST00000202206 2926 ntBASIC5.6□□□□□ -1.51
Scn1bP97952 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scn1bP97952 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Scn1bP97952 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC5.6□□□□□ -1.51
Scn1bP97952 Zfp60-201ENSMUST00000042641 2727 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Scn1bP97952 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Scn1bP97952 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Scn1bP97952 Olfr984-204ENSMUST00000217536 5114 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Scn1bP97952 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.59□□□□□ -1.51
Scn1bP97952 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Scn1bP97952 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC5.59□□□□□ -1.51
Scn1bP97952 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC5.59□□□□□ -1.51
Scn1bP97952 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC5.59□□□□□ -1.51
Scn1bP97952 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC5.59□□□□□ -1.51
Scn1bP97952 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC5.59□□□□□ -1.51
Scn1bP97952 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC5.59□□□□□ -1.51
Scn1bP97952 Gm19093-201ENSMUST00000210671 1454 ntBASIC5.59□□□□□ -1.51
Scn1bP97952 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Scn1bP97952 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Scn1bP97952 Ptprj-202ENSMUST00000111495 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Scn1bP97952 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.59□□□□□ -1.51
Scn1bP97952 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC5.59□□□□□ -1.51
Scn1bP97952 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Scn1bP97952 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Scn1bP97952 Gm6327-201ENSMUST00000171185 1335 ntBASIC5.59□□□□□ -1.51
Scn1bP97952 AC159624.1-201ENSMUST00000217762 1344 ntBASIC5.59□□□□□ -1.51
Scn1bP97952 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Scn1bP97952 Gm14180-201ENSMUST00000105066 78 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Scn1bP97952 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Scn1bP97952 Gm15366-201ENSMUST00000118433 1019 ntBASIC5.59□□□□□ -1.51
Scn1bP97952 Gm15153-201ENSMUST00000119867 274 ntBASIC5.59□□□□□ -1.51
Scn1bP97952 Rpl21-ps9-201ENSMUST00000119897 482 ntBASIC5.59□□□□□ -1.51
Scn1bP97952 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC5.59□□□□□ -1.51
Scn1bP97952 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC5.59□□□□□ -1.51
Scn1bP97952 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Scn1bP97952 Gm9064-201ENSMUST00000163579 566 ntBASIC5.59□□□□□ -1.51
Scn1bP97952 Olfr759-ps1-201ENSMUST00000174238 700 ntBASIC5.59□□□□□ -1.51
Scn1bP97952 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC5.59□□□□□ -1.51
Scn1bP97952 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Scn1bP97952 Gm18802-201ENSMUST00000186270 888 ntBASIC5.59□□□□□ -1.51
Scn1bP97952 Gm28114-201ENSMUST00000187232 379 ntBASIC5.59□□□□□ -1.51
Scn1bP97952 Gm28721-201ENSMUST00000187649 918 ntTSL 3 BASIC5.59□□□□□ -1.51
Scn1bP97952 Gm5103-201ENSMUST00000192081 1086 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Scn1bP97952 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Scn1bP97952 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC5.59□□□□□ -1.51
Scn1bP97952 Gm43744-201ENSMUST00000196387 688 ntBASIC5.59□□□□□ -1.51
Scn1bP97952 Gm42776-201ENSMUST00000198031 406 ntBASIC5.59□□□□□ -1.51
Scn1bP97952 Gm44108-201ENSMUST00000203525 422 ntBASIC5.59□□□□□ -1.51
Scn1bP97952 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.51
Scn1bP97952 Gm44582-201ENSMUST00000209125 445 ntBASIC5.59□□□□□ -1.51
Scn1bP97952 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC5.59□□□□□ -1.51
Scn1bP97952 Gm18255-201ENSMUST00000211316 765 ntBASIC5.59□□□□□ -1.51
Scn1bP97952 Serpina3a-201ENSMUST00000021496 1269 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Scn1bP97952 Gm4042-201ENSMUST00000216946 637 ntBASIC5.59□□□□□ -1.51
Scn1bP97952 1700020D12Rik-201ENSMUST00000221140 426 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Scn1bP97952 AC156569.1-201ENSMUST00000222020 3841 ntBASIC5.59□□□□□ -1.51
Scn1bP97952 AC154849.2-201ENSMUST00000223781 974 ntBASIC5.59□□□□□ -1.51
Scn1bP97952 CT030238.3-201ENSMUST00000227352 875 ntBASIC5.59□□□□□ -1.51
Scn1bP97952 Gm6195-201ENSMUST00000063059 357 ntBASIC5.59□□□□□ -1.51
Scn1bP97952 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC5.59□□□□□ -1.51
Scn1bP97952 Olfr1480-201ENSMUST00000072219 948 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Scn1bP97952 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Scn1bP97952 Gm15732-201ENSMUST00000079794 480 ntBASIC5.59□□□□□ -1.51
Scn1bP97952 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms