Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 4930519E07Rik-201ENSMUST00000200907 1665 ntBASIC5.69□□□□□ -1.5
Sox6P40645 Fat1-201ENSMUST00000098796 14627 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Sox6P40645 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sox6P40645 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Sox6P40645 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox6P40645 Gm42520-201ENSMUST00000199642 1502 ntBASIC5.69□□□□□ -1.5
Sox6P40645 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox6P40645 Fam26d-202ENSMUST00000218239 3075 ntBASIC5.68□□□□□ -1.5
Sox6P40645 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox6P40645 Nuf2-202ENSMUST00000111368 2405 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox6P40645 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
Sox6P40645 Gm37725-201ENSMUST00000193965 2125 ntBASIC5.68□□□□□ -1.5
Sox6P40645 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox6P40645 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox6P40645 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sox6P40645 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sox6P40645 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sox6P40645 Zfp317-202ENSMUST00000208694 3988 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox6P40645 Gm37864-201ENSMUST00000195308 3075 ntBASIC5.68□□□□□ -1.5
Sox6P40645 Olfr947-ps1-203ENSMUST00000215471 2177 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox6P40645 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sox6P40645 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sox6P40645 Atp6ap1l-201ENSMUST00000109541 1186 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox6P40645 Gm12813-201ENSMUST00000119615 902 ntBASIC5.68□□□□□ -1.5
Sox6P40645 Gm6620-201ENSMUST00000120113 715 ntBASIC5.68□□□□□ -1.5
Sox6P40645 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sox6P40645 D830026I12Rik-201ENSMUST00000124434 935 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sox6P40645 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC5.68□□□□□ -1.5
Sox6P40645 Gm4845-201ENSMUST00000179202 562 ntBASIC5.68□□□□□ -1.5
Sox6P40645 Hdlbp-204ENSMUST00000186164 3808 ntTSL 5 BASIC5.68□□□□□ -1.5
Sox6P40645 1700120G07Rik-202ENSMUST00000190881 885 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sox6P40645 Gm38237-201ENSMUST00000193366 376 ntBASIC5.68□□□□□ -1.5
Sox6P40645 Gm37974-201ENSMUST00000193668 220 ntTSL 3 BASIC5.68□□□□□ -1.5
Sox6P40645 Ighv1-45-201ENSMUST00000193677 352 ntBASIC5.68□□□□□ -1.5
Sox6P40645 Ighv1-83-201ENSMUST00000199643 351 ntBASIC5.68□□□□□ -1.5
Sox6P40645 Gm3321-201ENSMUST00000200603 1129 ntBASIC5.68□□□□□ -1.5
Sox6P40645 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sox6P40645 Gm18103-201ENSMUST00000216621 779 ntBASIC5.68□□□□□ -1.5
Sox6P40645 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC5.68□□□□□ -1.5
Sox6P40645 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC5.68□□□□□ -1.5
Sox6P40645 AV026068-220ENSMUST00000224153 1147 ntBASIC5.68□□□□□ -1.5
Sox6P40645 Vmn1r38-203ENSMUST00000227694 909 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sox6P40645 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox6P40645 Ms4a4b-201ENSMUST00000035258 1244 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox6P40645 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sox6P40645 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sox6P40645 Gm38118-201ENSMUST00000192052 2222 ntBASIC5.68□□□□□ -1.5
Sox6P40645 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox6P40645 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sox6P40645 Son-205ENSMUST00000122302 2449 ntTSL 5 BASIC5.68□□□□□ -1.5
Sox6P40645 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sox6P40645 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sox6P40645 Gm12185-202ENSMUST00000094476 5264 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sox6P40645 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sox6P40645 AC121997.2-201ENSMUST00000228095 2294 ntBASIC5.68□□□□□ -1.5
Sox6P40645 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sox6P40645 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox6P40645 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sox6P40645 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
Sox6P40645 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox6P40645 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox6P40645 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox6P40645 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sox6P40645 AC164107.1-202ENSMUST00000228953 1816 ntBASIC5.67□□□□□ -1.5
Sox6P40645 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox6P40645 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.67□□□□□ -1.5
Sox6P40645 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox6P40645 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
Sox6P40645 Olfr1389-203ENSMUST00000217595 3549 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sox6P40645 A730009L09Rik-201ENSMUST00000209558 2512 ntAPPRIS P5 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox6P40645 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.67□□□□□ -1.5
Sox6P40645 Ighv1-26-201ENSMUST00000103510 351 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Sox6P40645 Gm13455-201ENSMUST00000118767 517 ntBASIC5.67□□□□□ -1.5
Sox6P40645 Gm8855-201ENSMUST00000118888 878 ntBASIC5.67□□□□□ -1.5
Sox6P40645 Gm13669-201ENSMUST00000122366 457 ntBASIC5.67□□□□□ -1.5
Sox6P40645 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC5.67□□□□□ -1.5
Sox6P40645 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sox6P40645 Gm23207-201ENSMUST00000158665 102 ntBASIC5.67□□□□□ -1.5
Sox6P40645 Gm24465-201ENSMUST00000178398 107 ntBASIC5.67□□□□□ -1.5
Sox6P40645 Gm10428-201ENSMUST00000178750 399 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Sox6P40645 Gm5260-201ENSMUST00000186157 949 ntBASIC5.67□□□□□ -1.5
Sox6P40645 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
Sox6P40645 Gm42951-201ENSMUST00000199688 684 ntTSL 5 BASIC5.67□□□□□ -1.5
Sox6P40645 Gm32158-201ENSMUST00000200135 404 ntBASIC5.67□□□□□ -1.5
Sox6P40645 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC5.67□□□□□ -1.5
Sox6P40645 1700051K13Rik-201ENSMUST00000204426 696 ntBASIC5.67□□□□□ -1.5
Sox6P40645 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC5.67□□□□□ -1.5
Sox6P40645 Gm45628-201ENSMUST00000210849 274 ntBASIC5.67□□□□□ -1.5
Sox6P40645 AC154734.1-201ENSMUST00000219957 2141 ntBASIC5.67□□□□□ -1.5
Sox6P40645 Gm11360-201ENSMUST00000221898 262 ntBASIC5.67□□□□□ -1.5
Sox6P40645 AC174082.2-201ENSMUST00000222094 543 ntBASIC5.67□□□□□ -1.5
Sox6P40645 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox6P40645 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox6P40645 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Sox6P40645 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC5.67□□□□□ -1.5
Sox6P40645 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Sox6P40645 Olfr199-201ENSMUST00000099657 931 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
Sox6P40645 Olfr406-202ENSMUST00000214303 2842 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sox6P40645 Gm43719-201ENSMUST00000200088 2199 ntBASIC5.67□□□□□ -1.5
Sox6P40645 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms