Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Rfx3-201ENSMUST00000046898 4274 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BdnfP21237 Gm37766-201ENSMUST00000192244 2567 ntBASIC6.19□□□□□ -1.42
BdnfP21237 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
BdnfP21237 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BdnfP21237 Gm6526-201ENSMUST00000100643 1723 ntAPPRIS P5 TSL 5 BASIC6.19□□□□□ -1.42
BdnfP21237 Gm8401-201ENSMUST00000120248 1739 ntBASIC6.19□□□□□ -1.42
BdnfP21237 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
BdnfP21237 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BdnfP21237 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC6.19□□□□□ -1.42
BdnfP21237 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BdnfP21237 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
BdnfP21237 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC6.19□□□□□ -1.42
BdnfP21237 Gm7113-201ENSMUST00000120477 958 ntBASIC6.19□□□□□ -1.42
BdnfP21237 Gm13877-201ENSMUST00000120614 417 ntBASIC6.19□□□□□ -1.42
BdnfP21237 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC6.19□□□□□ -1.42
BdnfP21237 Snora81-201ENSMUST00000157310 178 ntBASIC6.19□□□□□ -1.42
BdnfP21237 Gm25057-201ENSMUST00000157366 88 ntBASIC6.19□□□□□ -1.42
BdnfP21237 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
BdnfP21237 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BdnfP21237 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC6.19□□□□□ -1.42
BdnfP21237 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
BdnfP21237 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
BdnfP21237 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC6.19□□□□□ -1.42
BdnfP21237 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
BdnfP21237 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
BdnfP21237 Gm28119-201ENSMUST00000185538 298 ntTSL 5 BASIC6.19□□□□□ -1.42
BdnfP21237 Gm29377-201ENSMUST00000185892 1161 ntTSL 5 BASIC6.19□□□□□ -1.42
BdnfP21237 Gm19206-201ENSMUST00000186401 827 ntBASIC6.19□□□□□ -1.42
BdnfP21237 Gm28114-201ENSMUST00000187232 379 ntBASIC6.19□□□□□ -1.42
BdnfP21237 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC6.19□□□□□ -1.42
BdnfP21237 Gm38204-201ENSMUST00000194835 619 ntTSL 2 BASIC6.19□□□□□ -1.42
BdnfP21237 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BdnfP21237 Gm44463-201ENSMUST00000198895 137 ntBASIC6.19□□□□□ -1.42
BdnfP21237 Gm43089-201ENSMUST00000199162 275 ntBASIC6.19□□□□□ -1.42
BdnfP21237 Gm42799-201ENSMUST00000201331 328 ntBASIC6.19□□□□□ -1.42
BdnfP21237 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
BdnfP21237 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC6.19□□□□□ -1.42
BdnfP21237 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BdnfP21237 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC6.19□□□□□ -1.42
BdnfP21237 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC6.19□□□□□ -1.42
BdnfP21237 Gm45072-201ENSMUST00000208673 929 ntBASIC6.19□□□□□ -1.42
BdnfP21237 Gm2225-201ENSMUST00000209570 377 ntBASIC6.19□□□□□ -1.42
BdnfP21237 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC6.19□□□□□ -1.42
BdnfP21237 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.19□□□□□ -1.42
BdnfP21237 AC155709.1-201ENSMUST00000218794 162 ntBASIC6.19□□□□□ -1.42
BdnfP21237 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.19□□□□□ -1.42
BdnfP21237 AC125064.1-201ENSMUST00000225801 295 ntBASIC6.19□□□□□ -1.42
BdnfP21237 AC133958.1-201ENSMUST00000227085 961 ntBASIC6.19□□□□□ -1.42
BdnfP21237 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
BdnfP21237 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
BdnfP21237 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
BdnfP21237 Gm5321-201ENSMUST00000072050 447 ntBASIC6.19□□□□□ -1.42
BdnfP21237 Gm21731-201ENSMUST00000079524 489 ntBASIC6.19□□□□□ -1.42
BdnfP21237 Cd40-203ENSMUST00000081310 668 ntAPPRIS ALT2 TSL 1 (best) BASIC6.19□□□□□ -1.42
BdnfP21237 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BdnfP21237 March1-211ENSMUST00000178982 4012 ntAPPRIS ALT1 TSL 5 BASIC6.19□□□□□ -1.42
BdnfP21237 Gm28407-201ENSMUST00000185630 1497 ntTSL 5 BASIC6.19□□□□□ -1.42
BdnfP21237 Gm28108-201ENSMUST00000186747 1497 ntTSL 5 BASIC6.19□□□□□ -1.42
BdnfP21237 Gm28218-202ENSMUST00000186782 1498 ntTSL 5 BASIC6.19□□□□□ -1.42
BdnfP21237 Gm29511-201ENSMUST00000187580 1497 ntTSL 5 BASIC6.19□□□□□ -1.42
BdnfP21237 Gm28367-201ENSMUST00000187942 1496 ntTSL 5 BASIC6.19□□□□□ -1.42
BdnfP21237 Gm29549-202ENSMUST00000189569 1497 ntTSL 5 BASIC6.19□□□□□ -1.42
BdnfP21237 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BdnfP21237 Pde7a-201ENSMUST00000091314 4454 ntAPPRIS P3 TSL 1 (best) BASIC6.19□□□□□ -1.42
BdnfP21237 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BdnfP21237 Gm38062-201ENSMUST00000192541 1856 ntBASIC6.19□□□□□ -1.42
BdnfP21237 Erc2-208ENSMUST00000210924 4871 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BdnfP21237 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
BdnfP21237 AC139750.1-201ENSMUST00000223962 1300 ntBASIC6.19□□□□□ -1.42
BdnfP21237 Myo3b-201ENSMUST00000060208 6256 ntAPPRIS P2 TSL 5 BASIC6.19□□□□□ -1.42
BdnfP21237 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC6.19□□□□□ -1.42
BdnfP21237 Gm15425-201ENSMUST00000119013 2711 ntBASIC6.19□□□□□ -1.42
BdnfP21237 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
BdnfP21237 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BdnfP21237 CT025660.2-201ENSMUST00000217654 3539 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
BdnfP21237 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BdnfP21237 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
BdnfP21237 Vmn2r112-201ENSMUST00000097381 2574 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BdnfP21237 Cntn5-202ENSMUST00000160216 4192 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
BdnfP21237 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BdnfP21237 Gm10636-201ENSMUST00000197639 2419 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
BdnfP21237 Nmd3-201ENSMUST00000029358 9135 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BdnfP21237 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BdnfP21237 Gm38284-201ENSMUST00000194803 4539 ntBASIC6.18□□□□□ -1.42
BdnfP21237 Mbd3l2-201ENSMUST00000051008 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BdnfP21237 9830132P13Rik-201ENSMUST00000198240 4187 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
BdnfP21237 Zfp420-201ENSMUST00000057652 2744 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
BdnfP21237 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
BdnfP21237 Igkv18-36-201ENSMUST00000103373 344 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
BdnfP21237 Eqtn-202ENSMUST00000107097 1164 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
BdnfP21237 Zfp973-201ENSMUST00000108985 1295 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
BdnfP21237 Cypt3-202ENSMUST00000112573 669 ntAPPRIS ALT2 TSL 1 (best) BASIC6.18□□□□□ -1.42
BdnfP21237 Rpl36-ps7-201ENSMUST00000119462 315 ntBASIC6.18□□□□□ -1.42
BdnfP21237 Gm15801-201ENSMUST00000120920 522 ntBASIC6.18□□□□□ -1.42
BdnfP21237 Gm11965-201ENSMUST00000122017 277 ntBASIC6.18□□□□□ -1.42
BdnfP21237 1700041M05Rik-201ENSMUST00000130055 306 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
BdnfP21237 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
BdnfP21237 Gm8783-201ENSMUST00000159764 522 ntBASIC6.18□□□□□ -1.42
BdnfP21237 Gm15508-201ENSMUST00000160330 325 ntBASIC6.18□□□□□ -1.42
BdnfP21237 Gm2976-201ENSMUST00000160362 513 ntBASIC6.18□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms