Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Gm31749-201ENSMUST00000206873 598 ntTSL 3 BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Osbpl9-214ENSMUST00000160774 2765 ntTSL 5 BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Gm18310-201ENSMUST00000206494 3912 ntBASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Rnd3-203ENSMUST00000154545 2967 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Zfp719-201ENSMUST00000058104 4494 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Klrk1-205ENSMUST00000168919 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 LOC102637012-201ENSMUST00000217248 2562 ntBASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Gm38325-201ENSMUST00000194507 1377 ntBASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Gm15950-201ENSMUST00000162902 1973 ntBASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Gm38377-201ENSMUST00000193253 3772 ntBASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Gm23211-201ENSMUST00000122717 308 ntBASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Gm11844-201ENSMUST00000129207 459 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Gm29160-201ENSMUST00000190094 699 ntBASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Col6a3E9PWQ3 Gm6503-201ENSMUST00000210829 2225 ntBASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Gm37127-201ENSMUST00000192924 3036 ntBASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Ank3-206ENSMUST00000092434 5886 ntAPPRIS P4 TSL 5 BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 AC159006.2-201ENSMUST00000228734 4144 ntBASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Phf11b-201ENSMUST00000166121 1184 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Gm6719-201ENSMUST00000202067 335 ntBASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Gm18601-201ENSMUST00000220831 634 ntBASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Defb35-201ENSMUST00000076786 267 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Adgrl2-204ENSMUST00000195988 4541 ntTSL 5 BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Zscan29-202ENSMUST00000110661 5072 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Itk-203ENSMUST00000109237 4268 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Olfr1499-202ENSMUST00000216659 1834 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Pax6-208ENSMUST00000111088 4427 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Ehbp1-201ENSMUST00000045167 4821 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 AC098728.1-202ENSMUST00000226656 2198 ntBASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Gm2065-201ENSMUST00000194697 2757 ntBASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Gm25168-201ENSMUST00000104189 132 ntBASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Gm15290-201ENSMUST00000132880 577 ntTSL 3 BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Gm5963-201ENSMUST00000143451 236 ntBASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Gm24113-201ENSMUST00000157477 276 ntBASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Gm23276-201ENSMUST00000157913 138 ntBASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Gm16114-201ENSMUST00000161930 300 ntBASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Gm29331-201ENSMUST00000187215 605 ntTSL 5 BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Gm8454-201ENSMUST00000196980 811 ntBASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Gm7042-201ENSMUST00000223027 384 ntBASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Gm4861-201ENSMUST00000068546 957 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Bcl2a1b-201ENSMUST00000068569 817 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Kif20a-202ENSMUST00000167161 3565 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Eps8-202ENSMUST00000100841 4151 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Zc3h12c-201ENSMUST00000165519 6133 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Pot1b-201ENSMUST00000086876 3499 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 C630043F03Rik-201ENSMUST00000122923 2581 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC5.78□□□□□ -1.48
Col6a3E9PWQ3 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.77□□□□□ -1.48
Col6a3E9PWQ3 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Col6a3E9PWQ3 Gm15660-201ENSMUST00000118997 478 ntBASIC5.77□□□□□ -1.49
Col6a3E9PWQ3 Gm15357-201ENSMUST00000119160 285 ntBASIC5.77□□□□□ -1.49
Col6a3E9PWQ3 Olfr637-ps1-201ENSMUST00000120386 471 ntBASIC5.77□□□□□ -1.49
Col6a3E9PWQ3 Gm12488-201ENSMUST00000122449 499 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 64.3 ms