Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Vmn1r4-201ENSMUST00000096612 1034 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 F930017D23Rik-201ENSMUST00000099888 1836 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Naip3-201ENSMUST00000118082 4208 ntBASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Olfr1152-202ENSMUST00000213308 6201 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Hnrnpc-207ENSMUST00000227536 1301 ntBASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Gm37056-201ENSMUST00000192141 1865 ntBASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Gm14367-201ENSMUST00000119214 1497 ntBASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Btbd35f9-201ENSMUST00000178219 1497 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Btbd35f22-201ENSMUST00000178747 1497 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Btbd35f30-201ENSMUST00000179069 1497 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Btbd35f25-201ENSMUST00000179086 1497 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Btbd35f29-201ENSMUST00000179532 1497 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Btbd35f26-201ENSMUST00000180197 1497 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Cdc40Q9DC48 AC154630.1-201ENSMUST00000215334 2440 ntBASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 1110059G10Rik-201ENSMUST00000035154 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Zfp791-202ENSMUST00000211109 2946 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Gm37435-201ENSMUST00000192078 3947 ntBASIC5.7□□□□□ -1.5
Cdc40Q9DC48 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Zfp2-202ENSMUST00000109129 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Ppp1r1c-203ENSMUST00000111780 708 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Gm11821-201ENSMUST00000117335 979 ntBASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Gm12442-201ENSMUST00000118372 338 ntBASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Gm12677-201ENSMUST00000118668 426 ntBASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Gm11925-201ENSMUST00000121375 535 ntBASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Gm24687-201ENSMUST00000157758 241 ntBASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Gm28149-201ENSMUST00000187102 378 ntBASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Gm28768-201ENSMUST00000189034 378 ntBASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Gm8869-201ENSMUST00000195222 947 ntBASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Gm44239-201ENSMUST00000204228 271 ntBASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Gm44243-201ENSMUST00000204323 692 ntBASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Gm45343-201ENSMUST00000210452 828 ntBASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Gm7570-201ENSMUST00000215246 698 ntBASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Tmed6-201ENSMUST00000034393 871 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Gm5321-201ENSMUST00000072050 447 ntBASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Gm42892-201ENSMUST00000196227 3973 ntBASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Gm38142-201ENSMUST00000194093 3555 ntBASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 6330410L21Rik-201ENSMUST00000199846 3871 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Ehf-202ENSMUST00000111174 1307 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Olfr1179-202ENSMUST00000213157 1309 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Olfr1097-202ENSMUST00000217403 4430 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Gm8126-201ENSMUST00000169587 1764 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 4933406B17Rik-201ENSMUST00000212602 4333 ntTSL 5 BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Cdc40Q9DC48 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gm43588-201ENSMUST00000201862 2298 ntBASIC5.69□□□□□ -1.5
Cdc40Q9DC48 AC123629.1-201ENSMUST00000225669 1364 ntBASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Elovl2-201ENSMUST00000021793 3840 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gm43503-201ENSMUST00000200033 3408 ntBASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Trmt10a-206ENSMUST00000162864 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gm44045-201ENSMUST00000204906 2520 ntBASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 AC159244.3-201ENSMUST00000222887 3153 ntBASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gm24434-201ENSMUST00000104081 132 ntBASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gm25415-201ENSMUST00000104220 132 ntBASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Foxp2-202ENSMUST00000115469 1293 ntTSL 5 BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 A730017C20Rik-203ENSMUST00000118510 785 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Dnajc5b-203ENSMUST00000118968 806 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gm13626-201ENSMUST00000119435 402 ntBASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gm14712-201ENSMUST00000120195 772 ntBASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gm8317-201ENSMUST00000121261 471 ntBASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gstm2-201ENSMUST00000012348 1064 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Cdc40Q9DC48 1700091H14Rik-201ENSMUST00000167772 590 ntBASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gm26923-201ENSMUST00000182615 996 ntBASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Mir6973b-201ENSMUST00000184185 80 ntBASIC5.69□□□□□ -1.5
Cdc40Q9DC48 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms