Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Lsm1Q8VC85 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Gm37262-201ENSMUST00000192816 1818 ntBASIC5.84□□□□□ -1.47
Lsm1Q8VC85 CT009696.4-201ENSMUST00000213487 1801 ntTSL 5 BASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Igkv12-44-201ENSMUST00000103367 401 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Dnajc5b-202ENSMUST00000118735 1035 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Gm11617-201ENSMUST00000119609 639 ntBASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Gm26162-201ENSMUST00000157793 132 ntBASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Gm23762-201ENSMUST00000158348 106 ntBASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Gm3242-201ENSMUST00000171273 485 ntBASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Gm6119-201ENSMUST00000193443 1206 ntBASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Gm37375-201ENSMUST00000193859 387 ntBASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Gm37270-201ENSMUST00000194277 330 ntBASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Gm37774-201ENSMUST00000194401 245 ntBASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Gm37385-201ENSMUST00000195223 387 ntBASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Gm4332-201ENSMUST00000196114 346 ntBASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Gm5554-201ENSMUST00000199726 1206 ntBASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Gm43798-201ENSMUST00000202056 394 ntBASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Gm18290-201ENSMUST00000202900 844 ntBASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Gm8479-201ENSMUST00000203825 718 ntBASIC5.84□□□□□ -1.47
Lsm1Q8VC85 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC5.84□□□□□ -1.47
Lsm1Q8VC85 AC122273.1-202ENSMUST00000213884 695 ntTSL 3 BASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Gpr87-201ENSMUST00000056898 1080 ntBASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Olfr267-201ENSMUST00000059608 944 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Gm29486-201ENSMUST00000088648 372 ntBASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Olfr446-202ENSMUST00000215369 4399 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Lsm1Q8VC85 Zfp758-202ENSMUST00000088765 2973 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
Lsm1Q8VC85 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Lsm1Q8VC85 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
Lsm1Q8VC85 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
Lsm1Q8VC85 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.48
Lsm1Q8VC85 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Lsm1Q8VC85 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Lsm1Q8VC85 Il5-201ENSMUST00000048605 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Lsm1Q8VC85 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
Lsm1Q8VC85 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Rab30-203ENSMUST00000107180 1406 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Sirpb1c-204ENSMUST00000108352 1436 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC5.83□□□□□ -1.48
Lsm1Q8VC85 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Gm5868-201ENSMUST00000031124 1382 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Gm38372-201ENSMUST00000194854 4028 ntBASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Olfr1036-201ENSMUST00000164985 3203 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Prkg2-205ENSMUST00000162619 1308 ntTSL 5 BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Gm45493-201ENSMUST00000209494 3948 ntBASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Gm25593-201ENSMUST00000102272 96 ntBASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Gm25346-201ENSMUST00000104509 128 ntBASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Gm8279-201ENSMUST00000112767 998 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Gm16044-201ENSMUST00000118475 450 ntBASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Gm15696-201ENSMUST00000121730 445 ntBASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Gm16330-201ENSMUST00000128324 297 ntBASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Gm15056-202ENSMUST00000167686 314 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Gm26910-201ENSMUST00000180450 698 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Gm5430-201ENSMUST00000182525 915 ntBASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Gm27782-201ENSMUST00000185059 199 ntBASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 BC024386-203ENSMUST00000209817 825 ntTSL 5 BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 4930545H06Rik-201ENSMUST00000218225 763 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 AC158521.1-202ENSMUST00000224352 645 ntBASIC5.83□□□□□ -1.48
Lsm1Q8VC85 AC132317.2-201ENSMUST00000227301 519 ntBASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Raet1d-201ENSMUST00000095795 1271 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Agl-201ENSMUST00000040603 9625 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Gm43891-201ENSMUST00000205132 3112 ntBASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Vmn1r51-209ENSMUST00000227911 4021 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Arsk-201ENSMUST00000120573 3657 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Gm38362-201ENSMUST00000192999 2064 ntBASIC5.83□□□□□ -1.48
Lsm1Q8VC85 Gm12057-201ENSMUST00000117244 1427 ntBASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Trp53inp1-201ENSMUST00000029865 5404 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Glb1l3-203ENSMUST00000210274 2532 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Lsm1Q8VC85 Vmn1r89-207ENSMUST00000227390 1348 ntAPPRIS ALT2 BASIC5.82□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms