Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm43850-201ENSMUST00000202021 578 ntBASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 Lair1-209ENSMUST00000205296 412 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 Spaca7-202ENSMUST00000209428 758 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 Gm33838-201ENSMUST00000214038 786 ntTSL 5 BASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 AC105950.1-201ENSMUST00000222637 408 ntBASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 AC116596.2-203ENSMUST00000227345 731 ntBASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 Gm6436-201ENSMUST00000077163 451 ntBASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 Gm23686-201ENSMUST00000083241 164 ntBASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 Gm22351-201ENSMUST00000083925 107 ntBASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 Hist1h2bb-201ENSMUST00000099703 508 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 Gm44045-201ENSMUST00000204906 2520 ntBASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 Adgrg2-207ENSMUST00000112408 4708 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 Gm37289-201ENSMUST00000195409 1402 ntBASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 Gm37717-201ENSMUST00000192647 3027 ntBASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 Ccdc7a-202ENSMUST00000108747 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 Pou1f1-204ENSMUST00000176330 1310 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 Mug1-201ENSMUST00000032228 4657 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
Lrif1Q8CDD9 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 4922502D21Rik-201ENSMUST00000051283 1582 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Sgip1-202ENSMUST00000072481 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Ceacam12-202ENSMUST00000108483 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Omd-202ENSMUST00000221170 2249 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Olfr358-201ENSMUST00000100146 1059 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Gm14326-201ENSMUST00000108928 767 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Gm21103-201ENSMUST00000112737 984 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Ap3s1-ps1-201ENSMUST00000117113 579 ntBASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Gm15901-201ENSMUST00000117663 941 ntBASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Gm9506-201ENSMUST00000118516 320 ntBASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 4930551O13Rik-201ENSMUST00000145585 1065 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Gm12867-201ENSMUST00000151216 457 ntTSL 3 BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Gm13839-201ENSMUST00000151639 506 ntTSL 2 BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Gm3047-201ENSMUST00000164069 822 ntAPPRIS P5 TSL 5 BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Gm3029-201ENSMUST00000168306 984 ntAPPRIS P5 TSL 5 BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Sptssb-202ENSMUST00000171529 772 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Gm18006-201ENSMUST00000177411 662 ntBASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Gm18700-201ENSMUST00000185791 553 ntBASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Gm37581-201ENSMUST00000192371 988 ntBASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Gm6525-201ENSMUST00000193882 1029 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Gm7769-201ENSMUST00000212900 933 ntBASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 AC153729.3-201ENSMUST00000213319 781 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Cst12-201ENSMUST00000028932 644 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Olfr148-201ENSMUST00000050807 1017 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Gm6990-201ENSMUST00000086830 348 ntBASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Rapgef6-204ENSMUST00000108894 3475 ntTSL 5 BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Gm35256-201ENSMUST00000212780 3269 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Akt3-202ENSMUST00000111159 4906 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 9330175M20Rik-201ENSMUST00000189867 2552 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC5.97□□□□□ -1.45
Lrif1Q8CDD9 Ccr9-203ENSMUST00000166236 5197 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Lrif1Q8CDD9 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Lrif1Q8CDD9 Epyc-202ENSMUST00000105285 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Lrif1Q8CDD9 AL591843.1-201ENSMUST00000223686 3082 ntBASIC5.96□□□□□ -1.45
Lrif1Q8CDD9 Foxp2-209ENSMUST00000131414 1381 ntTSL 5 BASIC5.96□□□□□ -1.45
Lrif1Q8CDD9 Bche-201ENSMUST00000029367 6210 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Lrif1Q8CDD9 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC5.96□□□□□ -1.46
Lrif1Q8CDD9 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Lrif1Q8CDD9 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Lrif1Q8CDD9 Gm11799-201ENSMUST00000116110 460 ntBASIC5.96□□□□□ -1.46
Lrif1Q8CDD9 Gm12813-201ENSMUST00000119615 902 ntBASIC5.96□□□□□ -1.46
Lrif1Q8CDD9 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC5.96□□□□□ -1.46
Lrif1Q8CDD9 Gm12438-201ENSMUST00000122034 336 ntBASIC5.96□□□□□ -1.46
Lrif1Q8CDD9 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC5.96□□□□□ -1.46
Lrif1Q8CDD9 Gm14747-201ENSMUST00000149888 984 ntBASIC5.96□□□□□ -1.46
Lrif1Q8CDD9 Sox5os4-201ENSMUST00000155562 365 ntTSL 3 BASIC5.96□□□□□ -1.46
Lrif1Q8CDD9 Gm24363-201ENSMUST00000158440 311 ntBASIC5.96□□□□□ -1.46
Lrif1Q8CDD9 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC5.96□□□□□ -1.46
Lrif1Q8CDD9 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Lrif1Q8CDD9 Gm10177-201ENSMUST00000160052 444 ntBASIC5.96□□□□□ -1.46
Lrif1Q8CDD9 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC5.96□□□□□ -1.46
Lrif1Q8CDD9 Gm20475-201ENSMUST00000174884 263 ntTSL 3 BASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms