Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Gip-201ENSMUST00000103156 607 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Gm25631-201ENSMUST00000104390 130 ntBASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Mptx2-201ENSMUST00000111224 794 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Gm14904-201ENSMUST00000117067 335 ntBASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Gm13672-201ENSMUST00000117554 459 ntBASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Gm15203-201ENSMUST00000117668 455 ntBASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Gm14783-201ENSMUST00000118900 663 ntBASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Gm14784-201ENSMUST00000121604 663 ntBASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Gm10913-201ENSMUST00000133732 463 ntBASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Gm25281-201ENSMUST00000157270 104 ntBASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Gm22101-201ENSMUST00000157928 103 ntBASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Gm16027-201ENSMUST00000161618 758 ntBASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Gm16026-205ENSMUST00000162923 641 ntBASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Tshb-203ENSMUST00000172026 604 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Gm6803-201ENSMUST00000178301 435 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Gm8332-201ENSMUST00000179468 435 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Gm2035-201ENSMUST00000180053 435 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Gm27919-201ENSMUST00000185163 107 ntBASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Olfr1252-201ENSMUST00000186710 1099 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Vmn1r82-202ENSMUST00000191002 918 ntBASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Gm43357-201ENSMUST00000197132 342 ntTSL 3 BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Rps4x-ps-201ENSMUST00000199852 793 ntBASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Gm32916-203ENSMUST00000208033 789 ntTSL 5 BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Gm30790-202ENSMUST00000208527 809 ntTSL 5 BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Gm18469-201ENSMUST00000208850 439 ntBASIC8.04□□□□□ -1.12
Trim47Q8C0E3 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Gm8058-201ENSMUST00000217247 587 ntBASIC8.04□□□□□ -1.12
Trim47Q8C0E3 AC151971.2-201ENSMUST00000217540 909 ntBASIC8.04□□□□□ -1.12
Trim47Q8C0E3 AC110381.1-201ENSMUST00000218987 586 ntBASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Gm2022-201ENSMUST00000220585 435 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 AC131117.2-202ENSMUST00000224539 547 ntBASIC8.04□□□□□ -1.12
Trim47Q8C0E3 AC164294.1-201ENSMUST00000224682 688 ntBASIC8.04□□□□□ -1.12
Trim47Q8C0E3 CT009556.4-201ENSMUST00000227092 200 ntBASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Npm2-201ENSMUST00000062629 997 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Gm6195-201ENSMUST00000063059 357 ntBASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Olfr1416-201ENSMUST00000086837 939 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Tmem267-201ENSMUST00000099147 910 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Olfr1308-201ENSMUST00000099605 963 ntAPPRIS P1 BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Frmpd4-201ENSMUST00000112145 7924 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Cdk14-204ENSMUST00000115452 1567 ntTSL 5 BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 AC153564.1-201ENSMUST00000217771 3607 ntTSL 5 BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Gm37535-201ENSMUST00000194442 2365 ntBASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Masp1-201ENSMUST00000089883 2752 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Trim47Q8C0E3 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Gm44777-201ENSMUST00000205941 4052 ntBASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Olfr495-201ENSMUST00000210990 1440 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Nol8-205ENSMUST00000222197 4368 ntAPPRIS P2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Ldah-202ENSMUST00000169104 2626 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Liph-201ENSMUST00000060673 3793 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Zkscan16-201ENSMUST00000107554 2794 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Gm19136-201ENSMUST00000190706 2067 ntBASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Gm22707-201ENSMUST00000103834 110 ntBASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Rps15a-201ENSMUST00000106588 640 ntAPPRIS P1 TSL 3 BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Gm13352-201ENSMUST00000117515 262 ntBASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Gm13798-201ENSMUST00000118285 139 ntBASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Gm11913-201ENSMUST00000119094 336 ntBASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Gm14990-201ENSMUST00000122354 445 ntBASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Gm25981-201ENSMUST00000157921 295 ntBASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Gm2976-201ENSMUST00000160362 513 ntBASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Vmn1r176-201ENSMUST00000171073 915 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Gm26738-201ENSMUST00000181312 601 ntBASIC8.03□□□□□ -1.12
Trim47Q8C0E3 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Gm38050-201ENSMUST00000191904 238 ntBASIC8.03□□□□□ -1.12
Trim47Q8C0E3 9430087J23Rik-201ENSMUST00000195414 1152 ntBASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Trav5d-2-201ENSMUST00000196107 275 ntBASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Trav5n-2-201ENSMUST00000197136 275 ntBASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Gm44623-201ENSMUST00000207934 434 ntBASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Gm18863-201ENSMUST00000217004 1299 ntBASIC8.03□□□□□ -1.12
Trim47Q8C0E3 RMST_1.1-205ENSMUST00000218060 997 ntTSL 5 BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 AC131677.1-201ENSMUST00000218721 535 ntBASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC8.03□□□□□ -1.12
Trim47Q8C0E3 AC157572.1-201ENSMUST00000227187 825 ntBASIC8.03□□□□□ -1.12
Trim47Q8C0E3 CT025630.2-201ENSMUST00000228293 487 ntBASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC8.03□□□□□ -1.12
Trim47Q8C0E3 Olfr610-201ENSMUST00000063109 948 ntAPPRIS P1 BASIC8.03□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 133.2 ms