Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Igkv8-21-201ENSMUST00000103387 382 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Clcn1Q64347 Gm24430-201ENSMUST00000104077 104 ntBASIC9.22□□□□□ -0.93
Clcn1Q64347 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
Clcn1Q64347 Fbxo48-202ENSMUST00000109635 1098 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Clcn1Q64347 Gm12370-201ENSMUST00000117809 604 ntBASIC9.22□□□□□ -0.93
Clcn1Q64347 Gm12717-201ENSMUST00000118427 983 ntBASIC9.22□□□□□ -0.93
Clcn1Q64347 Gm5843-201ENSMUST00000121631 476 ntBASIC9.22□□□□□ -0.93
Clcn1Q64347 Gm11575-201ENSMUST00000122243 228 ntBASIC9.22□□□□□ -0.93
Clcn1Q64347 Gm14990-201ENSMUST00000122354 445 ntBASIC9.22□□□□□ -0.93
Clcn1Q64347 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC9.22□□□□□ -0.93
Clcn1Q64347 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC9.22□□□□□ -0.93
Clcn1Q64347 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC9.22□□□□□ -0.93
Clcn1Q64347 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Clcn1Q64347 Gm12526-201ENSMUST00000154462 615 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Clcn1Q64347 Gm17022-201ENSMUST00000166415 922 ntBASIC9.22□□□□□ -0.93
Clcn1Q64347 Gm24155-201ENSMUST00000175259 110 ntBASIC9.22□□□□□ -0.93
Clcn1Q64347 Vmn1r-ps20-201ENSMUST00000176809 915 ntBASIC9.22□□□□□ -0.93
Clcn1Q64347 Gm21909-201ENSMUST00000178260 439 ntBASIC9.22□□□□□ -0.93
Clcn1Q64347 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Clcn1Q64347 Gm19200-201ENSMUST00000182579 1001 ntBASIC9.22□□□□□ -0.93
Clcn1Q64347 Gm21392-201ENSMUST00000182950 972 ntBASIC9.22□□□□□ -0.93
Clcn1Q64347 Gm38303-201ENSMUST00000192603 536 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Clcn1Q64347 Gm43033-201ENSMUST00000199682 425 ntBASIC9.22□□□□□ -0.93
Clcn1Q64347 Gm43926-201ENSMUST00000203978 430 ntBASIC9.22□□□□□ -0.93
Clcn1Q64347 Gm17834-201ENSMUST00000204322 891 ntBASIC9.22□□□□□ -0.93
Clcn1Q64347 Gm44613-202ENSMUST00000205962 691 ntTSL 3 BASIC9.22□□□□□ -0.93
Clcn1Q64347 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Clcn1Q64347 4930579P08Rik-201ENSMUST00000218193 1227 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Clcn1Q64347 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Clcn1Q64347 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Clcn1Q64347 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Clcn1Q64347 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
Clcn1Q64347 Gm25404-201ENSMUST00000082970 107 ntBASIC9.22□□□□□ -0.93
Clcn1Q64347 Gm23734-201ENSMUST00000083753 109 ntBASIC9.22□□□□□ -0.93
Clcn1Q64347 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Clcn1Q64347 Gm44021-201ENSMUST00000203055 3516 ntBASIC9.22□□□□□ -0.93
Clcn1Q64347 Gm37356-201ENSMUST00000193362 1613 ntBASIC9.22□□□□□ -0.93
Clcn1Q64347 4930548H24Rik-201ENSMUST00000031020 1641 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Clcn1Q64347 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Clcn1Q64347 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
Clcn1Q64347 Slc37a3-201ENSMUST00000090243 4030 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Clcn1Q64347 Ikbkg-217ENSMUST00000164101 6788 ntAPPRIS ALT2 TSL 5 BASIC9.22□□□□□ -0.93
Clcn1Q64347 Ikbkg-218ENSMUST00000180230 6785 ntAPPRIS P3 TSL 5 BASIC9.22□□□□□ -0.93
Clcn1Q64347 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Clcn1Q64347 Olfr701-201ENSMUST00000075414 3063 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Clcn1Q64347 Armc2-203ENSMUST00000160262 4810 ntAPPRIS P1 TSL 5 BASIC9.22□□□□□ -0.93
Clcn1Q64347 Gm9585-201ENSMUST00000219681 1404 ntBASIC9.22□□□□□ -0.93
Clcn1Q64347 Kcnab1-201ENSMUST00000049230 3245 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
Clcn1Q64347 Ripor2-204ENSMUST00000110383 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Clcn1Q64347 Zfp317-201ENSMUST00000079042 1824 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.93
Clcn1Q64347 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC9.21□□□□□ -0.93
Clcn1Q64347 Gm42972-201ENSMUST00000196937 5617 ntBASIC9.21□□□□□ -0.93
Clcn1Q64347 Sbf2-201ENSMUST00000033058 7154 ntAPPRIS P2 TSL 5 BASIC9.21□□□□□ -0.93
Clcn1Q64347 AC164433.1-201ENSMUST00000226138 1544 ntBASIC9.21□□□□□ -0.93
Clcn1Q64347 Tbc1d5-201ENSMUST00000024717 5435 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.93
Clcn1Q64347 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Clcn1Q64347 Gm4064-201ENSMUST00000187482 1561 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Clcn1Q64347 1700017N19Rik-210ENSMUST00000218464 1597 ntTSL 5 BASIC9.21□□□□□ -0.93
Clcn1Q64347 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC9.21□□□□□ -0.93
Clcn1Q64347 Gm13301-201ENSMUST00000121728 2446 ntBASIC9.21□□□□□ -0.93
Clcn1Q64347 Trav15n-1-201ENSMUST00000103590 349 ntAPPRIS ALT2 BASIC9.21□□□□□ -0.94
Clcn1Q64347 Gm8662-201ENSMUST00000118644 574 ntBASIC9.21□□□□□ -0.94
Clcn1Q64347 Gm11843-201ENSMUST00000118984 425 ntBASIC9.21□□□□□ -0.94
Clcn1Q64347 Amd-ps1-201ENSMUST00000120127 994 ntBASIC9.21□□□□□ -0.94
Clcn1Q64347 Gm7494-201ENSMUST00000121248 441 ntBASIC9.21□□□□□ -0.94
Clcn1Q64347 Gm11423-201ENSMUST00000136051 655 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Clcn1Q64347 Gm26353-201ENSMUST00000158224 255 ntBASIC9.21□□□□□ -0.94
Clcn1Q64347 Gm17194-201ENSMUST00000164610 348 ntBASIC9.21□□□□□ -0.94
Clcn1Q64347 Scgb1b20-201ENSMUST00000166714 421 ntAPPRIS P1 TSL 2 BASIC9.21□□□□□ -0.94
Clcn1Q64347 Gm27599-201ENSMUST00000183758 174 ntBASIC9.21□□□□□ -0.94
Clcn1Q64347 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Clcn1Q64347 Trav15d-1-dv6d-1-202ENSMUST00000186370 349 ntAPPRIS ALT2 BASIC9.21□□□□□ -0.94
Clcn1Q64347 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Clcn1Q64347 Gm28117-201ENSMUST00000188472 371 ntBASIC9.21□□□□□ -0.94
Clcn1Q64347 Gm29525-201ENSMUST00000189844 699 ntBASIC9.21□□□□□ -0.94
Clcn1Q64347 Gm29523-201ENSMUST00000191415 699 ntBASIC9.21□□□□□ -0.94
Clcn1Q64347 Gm28086-201ENSMUST00000191586 317 ntTSL 5 BASIC9.21□□□□□ -0.94
Clcn1Q64347 Gm42958-201ENSMUST00000197595 318 ntBASIC9.21□□□□□ -0.94
Clcn1Q64347 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC9.21□□□□□ -0.94
Clcn1Q64347 Gm4548-201ENSMUST00000208487 509 ntBASIC9.21□□□□□ -0.94
Clcn1Q64347 Gm45343-201ENSMUST00000210452 828 ntBASIC9.21□□□□□ -0.94
Clcn1Q64347 Olfr1041-ps1-201ENSMUST00000215884 271 ntBASIC9.21□□□□□ -0.94
Clcn1Q64347 Gm8075-202ENSMUST00000223088 682 ntTSL 5 BASIC9.21□□□□□ -0.94
Clcn1Q64347 AC159267.1-201ENSMUST00000226702 678 ntBASIC9.21□□□□□ -0.94
Clcn1Q64347 Tas2r123-201ENSMUST00000071696 1002 ntAPPRIS P1 BASIC9.21□□□□□ -0.94
Clcn1Q64347 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC9.21□□□□□ -0.94
Clcn1Q64347 Gk-202ENSMUST00000113978 4279 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Clcn1Q64347 Slc7a12-201ENSMUST00000037321 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Clcn1Q64347 T2-201ENSMUST00000163578 1755 ntTSL 5 BASIC9.21□□□□□ -0.94
Clcn1Q64347 Cast-210ENSMUST00000223126 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Clcn1Q64347 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Clcn1Q64347 Kif4-ps-201ENSMUST00000184686 3665 ntBASIC9.21□□□□□ -0.94
Clcn1Q64347 Enpep-201ENSMUST00000029658 4181 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.94
Clcn1Q64347 Ncapg-201ENSMUST00000117396 3703 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Clcn1Q64347 Psg22-202ENSMUST00000108481 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Clcn1Q64347 Psg22-203ENSMUST00000208221 1871 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Clcn1Q64347 Psg22-201ENSMUST00000051973 1869 ntAPPRIS P2 TSL 1 (best) BASIC9.21□□□□□ -0.94
Clcn1Q64347 Olfr452-204ENSMUST00000217701 2813 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Clcn1Q64347 Synj2-204ENSMUST00000115785 3778 ntTSL 1 (best) BASIC9.21□□□□□ -0.94
Clcn1Q64347 Olfr342-202ENSMUST00000216275 3818 ntAPPRIS P1 TSL 5 BASIC9.21□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 66.6 ms