Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gramd2-203ENSMUST00000128944 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox3P53784 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC5.91□□□□□ -1.46
Sox3P53784 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox3P53784 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox3P53784 Foxp2-204ENSMUST00000115472 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox3P53784 Nlrp1b-201ENSMUST00000094046 3525 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
Sox3P53784 Mir193b-201ENSMUST00000103784 79 ntBASIC5.91□□□□□ -1.46
Sox3P53784 Gm22710-201ENSMUST00000116892 125 ntBASIC5.91□□□□□ -1.46
Sox3P53784 Gm12193-201ENSMUST00000117250 379 ntBASIC5.91□□□□□ -1.46
Sox3P53784 Gm13245-201ENSMUST00000119646 260 ntBASIC5.91□□□□□ -1.46
Sox3P53784 Gm13207-201ENSMUST00000119862 773 ntBASIC5.91□□□□□ -1.46
Sox3P53784 Gm16423-201ENSMUST00000120078 947 ntBASIC5.91□□□□□ -1.46
Sox3P53784 Gm12094-201ENSMUST00000121781 472 ntBASIC5.91□□□□□ -1.46
Sox3P53784 Gm15187-201ENSMUST00000122329 264 ntBASIC5.91□□□□□ -1.46
Sox3P53784 4933406K04Rik-202ENSMUST00000124363 1064 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sox3P53784 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sox3P53784 Gm23662-201ENSMUST00000158046 111 ntBASIC5.91□□□□□ -1.46
Sox3P53784 Gm23408-201ENSMUST00000158523 265 ntBASIC5.91□□□□□ -1.46
Sox3P53784 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox3P53784 Gm20691-201ENSMUST00000176889 333 ntBASIC5.91□□□□□ -1.46
Sox3P53784 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC5.91□□□□□ -1.46
Sox3P53784 Scgb2b12-201ENSMUST00000183195 511 ntAPPRIS P1 TSL 2 BASIC5.91□□□□□ -1.46
Sox3P53784 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC5.91□□□□□ -1.46
Sox3P53784 Rhoay-ps2-201ENSMUST00000186362 581 ntBASIC5.91□□□□□ -1.46
Sox3P53784 Gm2325-201ENSMUST00000186637 581 ntBASIC5.91□□□□□ -1.46
Sox3P53784 Gm6137-201ENSMUST00000187552 578 ntBASIC5.91□□□□□ -1.46
Sox3P53784 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sox3P53784 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC5.91□□□□□ -1.46
Sox3P53784 6720469O03Rik-201ENSMUST00000206785 1201 ntBASIC5.91□□□□□ -1.46
Sox3P53784 Gm45070-201ENSMUST00000208100 246 ntBASIC5.91□□□□□ -1.46
Sox3P53784 LOC665443-201ENSMUST00000212284 796 ntBASIC5.91□□□□□ -1.46
Sox3P53784 AC133650.1-201ENSMUST00000217243 578 ntBASIC5.91□□□□□ -1.46
Sox3P53784 Gm46192-201ENSMUST00000217894 326 ntBASIC5.91□□□□□ -1.46
Sox3P53784 Gm3785-201ENSMUST00000221000 202 ntBASIC5.91□□□□□ -1.46
Sox3P53784 CT485612.1-201ENSMUST00000222555 382 ntBASIC5.91□□□□□ -1.46
Sox3P53784 Prl8a8-204ENSMUST00000224072 1128 ntAPPRIS ALT2 BASIC5.91□□□□□ -1.46
Sox3P53784 AC154583.1-201ENSMUST00000224788 655 ntBASIC5.91□□□□□ -1.46
Sox3P53784 BC147527-201ENSMUST00000081558 504 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Sox3P53784 Gm1527-201ENSMUST00000099170 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox3P53784 Dcun1d4-202ENSMUST00000087181 4117 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sox3P53784 Zfp35-201ENSMUST00000074941 3040 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox3P53784 Gm43874-201ENSMUST00000204853 2798 ntBASIC5.91□□□□□ -1.46
Sox3P53784 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Sox3P53784 Trim30d-201ENSMUST00000033211 1904 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox3P53784 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sox3P53784 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox3P53784 AC123629.1-201ENSMUST00000225669 1364 ntBASIC5.91□□□□□ -1.46
Sox3P53784 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC5.91□□□□□ -1.46
Sox3P53784 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox3P53784 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sox3P53784 Olfr1054-202ENSMUST00000213205 1410 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Sox3P53784 Vmn2r87-201ENSMUST00000164227 3036 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Sox3P53784 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sox3P53784 Gm43113-201ENSMUST00000199713 1754 ntBASIC5.9□□□□□ -1.46
Sox3P53784 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Sox3P53784 Gm15011-201ENSMUST00000117724 1480 ntBASIC5.9□□□□□ -1.46
Sox3P53784 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sox3P53784 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Sox3P53784 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Sox3P53784 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.9□□□□□ -1.46
Sox3P53784 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.46
Sox3P53784 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sox3P53784 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC5.9□□□□□ -1.46
Sox3P53784 Cypt1-202ENSMUST00000115422 661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.9□□□□□ -1.46
Sox3P53784 Gm14900-201ENSMUST00000120304 733 ntBASIC5.9□□□□□ -1.46
Sox3P53784 Gm12229-201ENSMUST00000120487 468 ntBASIC5.9□□□□□ -1.46
Sox3P53784 Gm15801-201ENSMUST00000120920 522 ntBASIC5.9□□□□□ -1.46
Sox3P53784 Gm12650-201ENSMUST00000121966 258 ntBASIC5.9□□□□□ -1.46
Sox3P53784 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC5.9□□□□□ -1.46
Sox3P53784 Gm23343-201ENSMUST00000158964 143 ntBASIC5.9□□□□□ -1.46
Sox3P53784 Gm8783-201ENSMUST00000159764 522 ntBASIC5.9□□□□□ -1.46
Sox3P53784 Rpl28-ps4-201ENSMUST00000170447 377 ntBASIC5.9□□□□□ -1.46
Sox3P53784 Gm27006-201ENSMUST00000182218 943 ntBASIC5.9□□□□□ -1.46
Sox3P53784 Gm29159-201ENSMUST00000187969 379 ntBASIC5.9□□□□□ -1.46
Sox3P53784 Gm18348-201ENSMUST00000191227 820 ntBASIC5.9□□□□□ -1.46
Sox3P53784 Gm8009-201ENSMUST00000191672 436 ntBASIC5.9□□□□□ -1.46
Sox3P53784 Gm37265-201ENSMUST00000191698 885 ntBASIC5.9□□□□□ -1.46
Sox3P53784 Gm7270-201ENSMUST00000195818 1128 ntBASIC5.9□□□□□ -1.46
Sox3P53784 Gm35013-201ENSMUST00000197218 832 ntBASIC5.9□□□□□ -1.46
Sox3P53784 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC5.9□□□□□ -1.46
Sox3P53784 Gm43105-201ENSMUST00000202987 459 ntBASIC5.9□□□□□ -1.46
Sox3P53784 Gm39336-201ENSMUST00000214933 260 ntTSL 3 BASIC5.9□□□□□ -1.46
Sox3P53784 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.9□□□□□ -1.46
Sox3P53784 Olfr779-202ENSMUST00000222301 929 ntAPPRIS P5 BASIC5.9□□□□□ -1.46
Sox3P53784 AC159979.1-201ENSMUST00000227927 342 ntBASIC5.9□□□□□ -1.46
Sox3P53784 Gm5582-201ENSMUST00000075251 522 ntBASIC5.9□□□□□ -1.46
Sox3P53784 Mir7-2-201ENSMUST00000083675 97 ntBASIC5.9□□□□□ -1.46
Sox3P53784 Gm12703-201ENSMUST00000145411 2039 ntTSL 2 BASIC5.9□□□□□ -1.47
Sox3P53784 Gm37078-201ENSMUST00000193314 2009 ntBASIC5.9□□□□□ -1.47
Sox3P53784 Olfr971-202ENSMUST00000214242 2027 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Sox3P53784 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Sox3P53784 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Sox3P53784 Vmn1r171-212ENSMUST00000228674 2488 ntAPPRIS ALT2 BASIC5.9□□□□□ -1.47
Sox3P53784 Vmn2r2-201ENSMUST00000077958 2484 ntAPPRIS P2 TSL 5 BASIC5.9□□□□□ -1.47
Sox3P53784 Olfr720-202ENSMUST00000206298 4437 ntAPPRIS P1 TSL 3 BASIC5.9□□□□□ -1.47
Sox3P53784 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Sox3P53784 Skil-203ENSMUST00000118204 2904 ntAPPRIS P3 TSL 1 (best) BASIC5.9□□□□□ -1.47
Sox3P53784 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.47
Sox3P53784 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC5.9□□□□□ -1.47
Sox3P53784 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC5.9□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 78 ms