Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Gm16074-201ENSMUST00000119524 444 ntBASIC6.23□□□□□ -1.41
Hoxa9P09631 Gm7189-201ENSMUST00000119811 429 ntBASIC6.23□□□□□ -1.41
Hoxa9P09631 Gm12399-201ENSMUST00000121475 446 ntBASIC6.23□□□□□ -1.41
Hoxa9P09631 4930412B13Rik-201ENSMUST00000149239 1276 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxa9P09631 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxa9P09631 Gm9597-201ENSMUST00000171913 602 ntBASIC6.23□□□□□ -1.41
Hoxa9P09631 Vmn2r-ps12-201ENSMUST00000175833 623 ntBASIC6.23□□□□□ -1.41
Hoxa9P09631 Gm26607-201ENSMUST00000180661 867 ntBASIC6.23□□□□□ -1.41
Hoxa9P09631 Mir6971-201ENSMUST00000183497 63 ntBASIC6.23□□□□□ -1.41
Hoxa9P09631 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxa9P09631 4933404I11Rik-201ENSMUST00000190294 1202 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxa9P09631 A830029E22Rik-201ENSMUST00000193672 1194 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxa9P09631 Gm37375-201ENSMUST00000193859 387 ntBASIC6.23□□□□□ -1.41
Hoxa9P09631 Gm37385-201ENSMUST00000195223 387 ntBASIC6.23□□□□□ -1.41
Hoxa9P09631 Gm33651-201ENSMUST00000200405 456 ntTSL 5 BASIC6.23□□□□□ -1.41
Hoxa9P09631 Gm43798-201ENSMUST00000202056 394 ntBASIC6.23□□□□□ -1.41
Hoxa9P09631 Gm18290-201ENSMUST00000202900 844 ntBASIC6.23□□□□□ -1.41
Hoxa9P09631 4933424M12Rik-202ENSMUST00000203451 1100 ntTSL 5 BASIC6.23□□□□□ -1.41
Hoxa9P09631 Gm19653-201ENSMUST00000204326 1039 ntBASIC6.23□□□□□ -1.41
Hoxa9P09631 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxa9P09631 Gm7557-201ENSMUST00000221935 865 ntBASIC6.23□□□□□ -1.41
Hoxa9P09631 Gm36262-201ENSMUST00000223274 499 ntBASIC6.23□□□□□ -1.41
Hoxa9P09631 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Hoxa9P09631 Vmn1r234-201ENSMUST00000079633 990 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Hoxa9P09631 Mir298-201ENSMUST00000083476 82 ntBASIC6.23□□□□□ -1.41
Hoxa9P09631 Mir412-201ENSMUST00000083636 80 ntBASIC6.23□□□□□ -1.41
Hoxa9P09631 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxa9P09631 Olfr201-201ENSMUST00000099656 927 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Hoxa9P09631 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxa9P09631 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Hoxa9P09631 Vmn2r-ps54-205ENSMUST00000182110 2587 ntBASIC6.23□□□□□ -1.41
Hoxa9P09631 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC6.23□□□□□ -1.41
Hoxa9P09631 Gm37106-201ENSMUST00000193760 1532 ntBASIC6.23□□□□□ -1.41
Hoxa9P09631 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxa9P09631 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxa9P09631 Nsun4-206ENSMUST00000165493 3920 ntTSL 2 BASIC6.23□□□□□ -1.41
Hoxa9P09631 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxa9P09631 Dlgap5-208ENSMUST00000180299 4067 ntAPPRIS ALT2 TSL 2 BASIC6.23□□□□□ -1.41
Hoxa9P09631 Ptprz1-204ENSMUST00000202102 4947 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxa9P09631 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC6.23□□□□□ -1.41
Hoxa9P09631 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Hoxa9P09631 Grik2-207ENSMUST00000218823 9427 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Hoxa9P09631 Vmn1r86-203ENSMUST00000227220 6445 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Hoxa9P09631 AY512915-201ENSMUST00000089303 1823 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxa9P09631 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Hoxa9P09631 Gm37183-201ENSMUST00000191712 3405 ntBASIC6.22□□□□□ -1.41
Hoxa9P09631 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxa9P09631 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
Hoxa9P09631 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxa9P09631 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxa9P09631 Zdhhc17-201ENSMUST00000041723 4548 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxa9P09631 Nusap1-201ENSMUST00000028771 3526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxa9P09631 Gm43588-201ENSMUST00000201862 2298 ntBASIC6.22□□□□□ -1.41
Hoxa9P09631 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Hoxa9P09631 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.22□□□□□ -1.41
Hoxa9P09631 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC6.22□□□□□ -1.41
Hoxa9P09631 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Hoxa9P09631 Gm25345-201ENSMUST00000104505 133 ntBASIC6.22□□□□□ -1.41
Hoxa9P09631 Gm13818-201ENSMUST00000119441 511 ntBASIC6.22□□□□□ -1.41
Hoxa9P09631 Gm14695-201ENSMUST00000121721 282 ntBASIC6.22□□□□□ -1.41
Hoxa9P09631 Gm7580-201ENSMUST00000132826 497 ntTSL 3 BASIC6.22□□□□□ -1.41
Hoxa9P09631 Gm11731-201ENSMUST00000139704 670 ntTSL 3 BASIC6.22□□□□□ -1.41
Hoxa9P09631 Gm25433-201ENSMUST00000158283 286 ntBASIC6.22□□□□□ -1.41
Hoxa9P09631 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxa9P09631 Spint4-201ENSMUST00000017454 751 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxa9P09631 Gm3650-201ENSMUST00000180600 747 ntBASIC6.22□□□□□ -1.41
Hoxa9P09631 Gm37784-201ENSMUST00000193233 189 ntBASIC6.22□□□□□ -1.41
Hoxa9P09631 Gm37758-201ENSMUST00000194275 629 ntBASIC6.22□□□□□ -1.41
Hoxa9P09631 Gm43390-201ENSMUST00000196614 421 ntBASIC6.22□□□□□ -1.41
Hoxa9P09631 Gm42619-201ENSMUST00000197564 1136 ntBASIC6.22□□□□□ -1.41
Hoxa9P09631 Gm42886-201ENSMUST00000199214 466 ntBASIC6.22□□□□□ -1.41
Hoxa9P09631 Gm45602-202ENSMUST00000211703 1036 ntTSL 5 BASIC6.22□□□□□ -1.41
Hoxa9P09631 Gm7802-201ENSMUST00000216464 262 ntBASIC6.22□□□□□ -1.41
Hoxa9P09631 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Hoxa9P09631 AC122188.1-201ENSMUST00000217534 312 ntBASIC6.22□□□□□ -1.41
Hoxa9P09631 AC127242.4-201ENSMUST00000221242 470 ntBASIC6.22□□□□□ -1.41
Hoxa9P09631 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxa9P09631 Cldn34b3-201ENSMUST00000096389 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxa9P09631 Mad2l1-202ENSMUST00000116605 7557 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxa9P09631 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxa9P09631 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxa9P09631 AC124516.1-201ENSMUST00000221845 3544 ntBASIC6.22□□□□□ -1.41
Hoxa9P09631 Olfr1309-204ENSMUST00000215045 5236 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Hoxa9P09631 Enpp2-204ENSMUST00000173516 2887 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxa9P09631 Pde1c-206ENSMUST00000166890 4728 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxa9P09631 Gm43526-201ENSMUST00000196666 1565 ntBASIC6.22□□□□□ -1.41
Hoxa9P09631 AC114585.1-201ENSMUST00000228080 3680 ntBASIC6.22□□□□□ -1.41
Hoxa9P09631 Fstl5-203ENSMUST00000160261 3173 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxa9P09631 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.22□□□□□ -1.41
Hoxa9P09631 Gm5799-201ENSMUST00000169023 1314 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Hoxa9P09631 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Hoxa9P09631 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC6.21□□□□□ -1.41
Hoxa9P09631 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Hoxa9P09631 AC155298.1-201ENSMUST00000225350 3250 ntBASIC6.21□□□□□ -1.41
Hoxa9P09631 Oas2-202ENSMUST00000081491 3961 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Hoxa9P09631 AC174459.1-201ENSMUST00000224476 1943 ntBASIC6.21□□□□□ -1.41
Hoxa9P09631 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC6.21□□□□□ -1.41
Hoxa9P09631 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Hoxa9P09631 Vmn1r31-203ENSMUST00000177318 2076 ntAPPRIS P2 TSL 2 BASIC6.21□□□□□ -1.41
Hoxa9P09631 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 121.6 ms