Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NpcdF8VQB8 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NpcdF8VQB8 AC144772.2-201ENSMUST00000228830 2859 ntBASIC8.13□□□□□ -1.11
NpcdF8VQB8 Xiap-204ENSMUST00000115095 6670 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NpcdF8VQB8 Ctsr-201ENSMUST00000021889 1414 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NpcdF8VQB8 Vmn1r57-204ENSMUST00000228062 2365 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
NpcdF8VQB8 Gm45112-201ENSMUST00000208576 5125 ntBASIC8.13□□□□□ -1.11
NpcdF8VQB8 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
NpcdF8VQB8 Elovl6-201ENSMUST00000071402 5951 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
NpcdF8VQB8 Gm42568-201ENSMUST00000195639 1841 ntBASIC8.13□□□□□ -1.11
NpcdF8VQB8 Sspo-206ENSMUST00000212740 15408 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
NpcdF8VQB8 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC8.13□□□□□ -1.11
NpcdF8VQB8 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
NpcdF8VQB8 Gm19024-201ENSMUST00000194681 1319 ntBASIC8.13□□□□□ -1.11
NpcdF8VQB8 Gm36933-201ENSMUST00000194945 3071 ntBASIC8.13□□□□□ -1.11
NpcdF8VQB8 Dip2b-203ENSMUST00000108971 8127 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
NpcdF8VQB8 AC159264.1-201ENSMUST00000224844 4257 ntBASIC8.13□□□□□ -1.11
NpcdF8VQB8 Gm24888-201ENSMUST00000104387 130 ntBASIC8.13□□□□□ -1.11
NpcdF8VQB8 Gm9427-201ENSMUST00000116187 651 ntBASIC8.13□□□□□ -1.11
NpcdF8VQB8 Spin2-ps1-201ENSMUST00000116643 875 ntBASIC8.13□□□□□ -1.11
NpcdF8VQB8 Gm24590-201ENSMUST00000116699 119 ntBASIC8.13□□□□□ -1.11
NpcdF8VQB8 Gm11905-201ENSMUST00000117653 678 ntBASIC8.13□□□□□ -1.11
NpcdF8VQB8 Gm12596-201ENSMUST00000124589 673 ntTSL 3 BASIC8.13□□□□□ -1.11
NpcdF8VQB8 Gm3757-201ENSMUST00000125878 675 ntBASIC8.13□□□□□ -1.11
NpcdF8VQB8 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC8.13□□□□□ -1.11
NpcdF8VQB8 Gm9890-201ENSMUST00000171867 537 ntBASIC8.13□□□□□ -1.11
NpcdF8VQB8 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC8.13□□□□□ -1.11
NpcdF8VQB8 Spin2-ps6-201ENSMUST00000178459 525 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
NpcdF8VQB8 Mir6361-201ENSMUST00000185079 101 ntBASIC8.13□□□□□ -1.11
NpcdF8VQB8 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC8.13□□□□□ -1.11
NpcdF8VQB8 4930512P04Rik-201ENSMUST00000197000 424 ntBASIC8.13□□□□□ -1.11
NpcdF8VQB8 Mir6906-201ENSMUST00000198998 58 ntBASIC8.13□□□□□ -1.11
NpcdF8VQB8 Gm42814-201ENSMUST00000199370 460 ntBASIC8.13□□□□□ -1.11
NpcdF8VQB8 Gm44239-201ENSMUST00000204228 271 ntBASIC8.13□□□□□ -1.11
NpcdF8VQB8 Gm7587-201ENSMUST00000207618 1021 ntBASIC8.13□□□□□ -1.11
NpcdF8VQB8 Gm39231-201ENSMUST00000209813 501 ntTSL 5 BASIC8.13□□□□□ -1.11
NpcdF8VQB8 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC8.13□□□□□ -1.11
NpcdF8VQB8 Gm3266-201ENSMUST00000217832 591 ntBASIC8.13□□□□□ -1.11
NpcdF8VQB8 Gm40646-201ENSMUST00000218243 490 ntTSL 5 BASIC8.13□□□□□ -1.11
NpcdF8VQB8 Gm46364-201ENSMUST00000218548 319 ntBASIC8.13□□□□□ -1.11
NpcdF8VQB8 AC147782.1-201ENSMUST00000219169 475 ntBASIC8.13□□□□□ -1.11
NpcdF8VQB8 AC157654.1-201ENSMUST00000224130 820 ntBASIC8.13□□□□□ -1.11
NpcdF8VQB8 AC107663.3-201ENSMUST00000225873 601 ntBASIC8.13□□□□□ -1.11
NpcdF8VQB8 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
NpcdF8VQB8 Ogfod1-203ENSMUST00000109556 5310 ntAPPRIS P2 TSL 1 (best) BASIC8.13□□□□□ -1.11
NpcdF8VQB8 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
NpcdF8VQB8 Olfr798-202ENSMUST00000204979 3590 ntAPPRIS P1 TSL 2 BASIC8.13□□□□□ -1.11
NpcdF8VQB8 Gm43771-201ENSMUST00000202931 1578 ntBASIC8.13□□□□□ -1.11
NpcdF8VQB8 Zmynd8-202ENSMUST00000088113 3757 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
NpcdF8VQB8 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
NpcdF8VQB8 Gm43335-201ENSMUST00000198299 3276 ntBASIC8.12□□□□□ -1.11
NpcdF8VQB8 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC8.12□□□□□ -1.11
NpcdF8VQB8 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NpcdF8VQB8 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC8.12□□□□□ -1.11
NpcdF8VQB8 Abca17-202ENSMUST00000121226 5317 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
NpcdF8VQB8 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NpcdF8VQB8 Pcdh15-227ENSMUST00000152655 3860 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NpcdF8VQB8 Nlrp9a-203ENSMUST00000117252 2796 ntTSL 2 BASIC8.12□□□□□ -1.11
NpcdF8VQB8 Zscan4e-202ENSMUST00000210521 1745 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
NpcdF8VQB8 Plch1-210ENSMUST00000162269 6539 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
NpcdF8VQB8 Psd4-202ENSMUST00000102942 11265 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NpcdF8VQB8 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
NpcdF8VQB8 Atrx-201ENSMUST00000101305 2903 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NpcdF8VQB8 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
NpcdF8VQB8 Sox6-210ENSMUST00000206034 8668 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
NpcdF8VQB8 Gm15186-201ENSMUST00000119345 563 ntBASIC8.12□□□□□ -1.11
NpcdF8VQB8 Gm12313-201ENSMUST00000121347 421 ntBASIC8.12□□□□□ -1.11
NpcdF8VQB8 Gm13440-201ENSMUST00000121665 496 ntBASIC8.12□□□□□ -1.11
NpcdF8VQB8 Gm11339-201ENSMUST00000154766 490 ntTSL 5 BASIC8.12□□□□□ -1.11
NpcdF8VQB8 Gm23317-201ENSMUST00000157999 129 ntBASIC8.12□□□□□ -1.11
NpcdF8VQB8 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC8.12□□□□□ -1.11
NpcdF8VQB8 Gm3594-201ENSMUST00000169152 997 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
NpcdF8VQB8 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NpcdF8VQB8 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC8.12□□□□□ -1.11
NpcdF8VQB8 C030007H22Rik-201ENSMUST00000186258 591 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
NpcdF8VQB8 Gm42580-201ENSMUST00000197223 753 ntBASIC8.12□□□□□ -1.11
NpcdF8VQB8 Gm43725-201ENSMUST00000200122 369 ntBASIC8.12□□□□□ -1.11
NpcdF8VQB8 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC8.12□□□□□ -1.11
NpcdF8VQB8 Gm26911-202ENSMUST00000204244 763 ntTSL 5 BASIC8.12□□□□□ -1.11
NpcdF8VQB8 Gm5317-201ENSMUST00000204445 847 ntBASIC8.12□□□□□ -1.11
NpcdF8VQB8 Gm43922-201ENSMUST00000205071 328 ntBASIC8.12□□□□□ -1.11
NpcdF8VQB8 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NpcdF8VQB8 Gm5324-201ENSMUST00000208115 476 ntBASIC8.12□□□□□ -1.11
NpcdF8VQB8 Gm45782-201ENSMUST00000212670 366 ntBASIC8.12□□□□□ -1.11
NpcdF8VQB8 Gm7368-201ENSMUST00000213307 367 ntBASIC8.12□□□□□ -1.11
NpcdF8VQB8 Gm19572-201ENSMUST00000214326 338 ntBASIC8.12□□□□□ -1.11
NpcdF8VQB8 Gm19174-201ENSMUST00000216944 956 ntBASIC8.12□□□□□ -1.11
NpcdF8VQB8 Gm4510-201ENSMUST00000218265 427 ntBASIC8.12□□□□□ -1.11
NpcdF8VQB8 AC127242.4-201ENSMUST00000221242 470 ntBASIC8.12□□□□□ -1.11
NpcdF8VQB8 Gm9269-201ENSMUST00000221661 578 ntBASIC8.12□□□□□ -1.11
NpcdF8VQB8 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC8.12□□□□□ -1.11
NpcdF8VQB8 Gm36756-201ENSMUST00000222011 1214 ntTSL 5 BASIC8.12□□□□□ -1.11
NpcdF8VQB8 Gm2139-201ENSMUST00000222569 1075 ntBASIC8.12□□□□□ -1.11
NpcdF8VQB8 AC124569.4-201ENSMUST00000223830 1220 ntBASIC8.12□□□□□ -1.11
NpcdF8VQB8 AC164297.5-201ENSMUST00000224365 198 ntBASIC8.12□□□□□ -1.11
NpcdF8VQB8 AC160962.2-201ENSMUST00000224761 632 ntBASIC8.12□□□□□ -1.11
NpcdF8VQB8 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
NpcdF8VQB8 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC8.12□□□□□ -1.11
NpcdF8VQB8 Nova1-201ENSMUST00000021438 7154 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
NpcdF8VQB8 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC8.12□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms