Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Clp1Q99LI9 Abcg8-201ENSMUST00000045714 3667 ntAPPRIS P3 TSL 1 (best) BASIC7.53□□□□□ -1.2
Clp1Q99LI9 B3gnt2-201ENSMUST00000055549 2602 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Clp1Q99LI9 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC7.53□□□□□ -1.2
Clp1Q99LI9 Vmn1r21-202ENSMUST00000203488 1673 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
Clp1Q99LI9 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Clp1Q99LI9 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC7.53□□□□□ -1.2
Clp1Q99LI9 A630072L19Rik-201ENSMUST00000180617 3405 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Clp1Q99LI9 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Clp1Q99LI9 Gm6614-202ENSMUST00000181628 2364 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Clp1Q99LI9 Gm42998-201ENSMUST00000197053 2371 ntBASIC7.53□□□□□ -1.2
Clp1Q99LI9 Zfp143-204ENSMUST00000209505 2693 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Clp1Q99LI9 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.2
Clp1Q99LI9 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC7.52□□□□□ -1.2
Clp1Q99LI9 Trappc13-201ENSMUST00000022224 2342 ntAPPRIS P4 TSL 1 (best) BASIC7.52□□□□□ -1.2
Clp1Q99LI9 Vmn1r11-202ENSMUST00000226968 2522 ntAPPRIS P2 BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Ifit1bl2-202ENSMUST00000112463 3217 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Clp1Q99LI9 A730036I17Rik-201ENSMUST00000143346 3431 ntTSL 2 BASIC7.52□□□□□ -1.21
Clp1Q99LI9 4921528I07Rik-202ENSMUST00000213446 3798 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm45887-201ENSMUST00000212672 2998 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Olfr293-203ENSMUST00000215280 2683 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Clp1Q99LI9 AC154806.2-201ENSMUST00000227212 2385 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gtdc1-201ENSMUST00000049051 2197 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Mphosph9-211ENSMUST00000184951 5008 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Olfr969-202ENSMUST00000213266 1597 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Mir804-201ENSMUST00000103251 95 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm23979-201ENSMUST00000104071 128 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm11845-201ENSMUST00000117886 327 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm12710-201ENSMUST00000119011 216 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm14054-201ENSMUST00000120744 704 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Olfr1376-ps1-201ENSMUST00000121306 955 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC7.52□□□□□ -1.21
Clp1Q99LI9 1700047F07Rik-201ENSMUST00000140321 543 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm6401-202ENSMUST00000164232 618 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm20461-201ENSMUST00000174600 305 ntTSL 3 BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm22990-201ENSMUST00000175427 89 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm17174-201ENSMUST00000178962 671 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Rpl23a-ps12-201ENSMUST00000179178 468 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Rps12l1-201ENSMUST00000183090 399 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm29337-201ENSMUST00000185425 284 ntTSL 3 BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Clp1Q99LI9 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Sly-201ENSMUST00000189109 797 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm20837-202ENSMUST00000190558 844 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm28211-201ENSMUST00000190920 315 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm37177-201ENSMUST00000193768 417 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm43431-201ENSMUST00000198577 340 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm44431-201ENSMUST00000203500 413 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm9367-201ENSMUST00000205703 546 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Olfr162-ps1-201ENSMUST00000206015 934 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm44943-201ENSMUST00000207254 300 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm44565-201ENSMUST00000208194 269 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Clp1Q99LI9 AC116465.1-201ENSMUST00000220324 235 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm35558-202ENSMUST00000221819 499 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC7.52□□□□□ -1.21
Clp1Q99LI9 AC156576.2-202ENSMUST00000222525 411 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC7.52□□□□□ -1.21
Clp1Q99LI9 4930469K13Rik-203ENSMUST00000224226 243 ntAPPRIS ALT2 BASIC7.52□□□□□ -1.21
Clp1Q99LI9 AC164436.1-201ENSMUST00000227074 772 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 AC121997.2-202ENSMUST00000227158 939 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gkn3-201ENSMUST00000032127 856 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Olfr539-201ENSMUST00000078967 960 ntAPPRIS P2 BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Gm25404-201ENSMUST00000082970 107 ntBASIC7.52□□□□□ -1.21
Clp1Q99LI9 Pcdh9-201ENSMUST00000068992 3714 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Pclo-201ENSMUST00000030691 20084 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
Clp1Q99LI9 Slc8a1-203ENSMUST00000163680 2913 ntAPPRIS ALT1 TSL 5 BASIC7.52□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms