Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 AW822073-201ENSMUST00000075305 555 ntBASIC6.4□□□□□ -1.38
Ndc1Q8VCB1 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Ndc1Q8VCB1 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Ndc1Q8VCB1 Platr26-201ENSMUST00000079720 641 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Ndc1Q8VCB1 n-R5s217-201ENSMUST00000083341 116 ntBASIC6.4□□□□□ -1.38
Ndc1Q8VCB1 Gm12667-201ENSMUST00000118299 1332 ntBASIC6.4□□□□□ -1.39
Ndc1Q8VCB1 Gm28818-201ENSMUST00000187553 2989 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Ndc1Q8VCB1 Trim12c-202ENSMUST00000130139 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ndc1Q8VCB1 Gm36527-201ENSMUST00000195500 3029 ntBASIC6.4□□□□□ -1.39
Ndc1Q8VCB1 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ndc1Q8VCB1 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ndc1Q8VCB1 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ndc1Q8VCB1 AC126549.1-201ENSMUST00000225044 3687 ntBASIC6.4□□□□□ -1.39
Ndc1Q8VCB1 Atp2b1-201ENSMUST00000020107 7130 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Ndc1Q8VCB1 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.39
Ndc1Q8VCB1 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Ndc1Q8VCB1 Amy2b-201ENSMUST00000120184 1577 ntBASIC6.4□□□□□ -1.39
Ndc1Q8VCB1 Gm19272-202ENSMUST00000185181 2217 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Ndc1Q8VCB1 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 AC139941.2-201ENSMUST00000221565 1824 ntBASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Olfr355-201ENSMUST00000100147 933 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Ssxb10-201ENSMUST00000103003 879 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Gm23768-201ENSMUST00000104440 131 ntBASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Gm13137-201ENSMUST00000118035 345 ntBASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Gm15390-201ENSMUST00000120323 738 ntBASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Gm15712-201ENSMUST00000120369 1156 ntBASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Gm16098-201ENSMUST00000141926 796 ntTSL 2 BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 1700047F07Rik-202ENSMUST00000143064 463 ntTSL 5 BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Gm3102-201ENSMUST00000164236 489 ntBASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Gm17064-201ENSMUST00000167690 452 ntBASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Gm24812-201ENSMUST00000175315 284 ntBASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Mir5617-201ENSMUST00000176786 57 ntBASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Gm9285-201ENSMUST00000177691 697 ntBASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Prl8a8-201ENSMUST00000018389 927 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Gm18342-201ENSMUST00000186987 694 ntBASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Gm2427-201ENSMUST00000189121 881 ntBASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Gm37581-201ENSMUST00000192371 988 ntBASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Gm18752-201ENSMUST00000192876 608 ntBASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Gm37637-201ENSMUST00000195540 1256 ntBASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Gm43005-201ENSMUST00000199015 648 ntBASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Gm43089-201ENSMUST00000199162 275 ntBASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Gm18861-201ENSMUST00000202509 1186 ntBASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Gm39232-201ENSMUST00000210760 1012 ntTSL 5 BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Gm34623-201ENSMUST00000210900 977 ntTSL 5 BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 AC153821.1-201ENSMUST00000217893 581 ntTSL 2 BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 AC174678.3-201ENSMUST00000227568 362 ntBASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Desi2-202ENSMUST00000069568 1193 ntBASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Mir425-201ENSMUST00000083645 85 ntBASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Sprr2a3-201ENSMUST00000090872 682 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Gm10267-201ENSMUST00000091916 258 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Prrg1-201ENSMUST00000114024 3900 ntAPPRIS P1 TSL 2 BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Gm37407-201ENSMUST00000194793 1316 ntBASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Pard3-203ENSMUST00000108752 3497 ntTSL 5 BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Vmn2r45-201ENSMUST00000164845 3619 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Gm43771-201ENSMUST00000202931 1578 ntBASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Nedd9-201ENSMUST00000021794 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Gm44186-201ENSMUST00000204118 2752 ntBASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Gm38082-201ENSMUST00000192800 6882 ntBASIC6.39□□□□□ -1.39
Ndc1Q8VCB1 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ndc1Q8VCB1 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Ndc1Q8VCB1 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Ndc1Q8VCB1 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Ndc1Q8VCB1 Rps15a-207ENSMUST00000172457 5130 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ndc1Q8VCB1 AC122346.1-201ENSMUST00000225266 3732 ntBASIC6.38□□□□□ -1.39
Ndc1Q8VCB1 Gm45290-201ENSMUST00000211177 3890 ntBASIC6.38□□□□□ -1.39
Ndc1Q8VCB1 Afm-202ENSMUST00000128740 2465 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ndc1Q8VCB1 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ndc1Q8VCB1 9530086O07Rik-201ENSMUST00000203503 2685 ntBASIC6.38□□□□□ -1.39
Ndc1Q8VCB1 Gm37896-201ENSMUST00000195611 2791 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ndc1Q8VCB1 Eps15-201ENSMUST00000030281 2980 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Ndc1Q8VCB1 Olfr571-203ENSMUST00000215773 5153 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Ndc1Q8VCB1 Gpr165-201ENSMUST00000033554 3170 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ndc1Q8VCB1 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC6.38□□□□□ -1.39
Ndc1Q8VCB1 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Ndc1Q8VCB1 Igkv11-106-201ENSMUST00000103331 346 ntBASIC6.38□□□□□ -1.39
Ndc1Q8VCB1 Tcrg-V6-201ENSMUST00000103555 403 ntAPPRIS ALT2 BASIC6.38□□□□□ -1.39
Ndc1Q8VCB1 Gm22284-201ENSMUST00000104132 132 ntBASIC6.38□□□□□ -1.39
Ndc1Q8VCB1 Gm14893-201ENSMUST00000117904 282 ntBASIC6.38□□□□□ -1.39
Ndc1Q8VCB1 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms