Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm14695-201ENSMUST00000121721 282 ntBASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Gm12618-201ENSMUST00000121754 483 ntBASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Gm25109-201ENSMUST00000122474 114 ntBASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Gm10658-201ENSMUST00000128125 1241 ntTSL 2 BASIC7.31□□□□□ -1.24
Vps53Q8CCB4 BC046251-201ENSMUST00000154632 3653 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Gm26162-201ENSMUST00000157793 132 ntBASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Gm6611-201ENSMUST00000163830 1272 ntBASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Rpl31-ps23-201ENSMUST00000180440 388 ntBASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Mir7235-201ENSMUST00000183796 56 ntBASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Gm37103-201ENSMUST00000191830 115 ntBASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Gm37376-201ENSMUST00000192176 453 ntBASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Gm37255-201ENSMUST00000193302 3060 ntBASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Gm38077-201ENSMUST00000193657 3245 ntBASIC7.31□□□□□ -1.24
Vps53Q8CCB4 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Gm44694-201ENSMUST00000205317 1298 ntBASIC7.31□□□□□ -1.24
Vps53Q8CCB4 AC140930.1-201ENSMUST00000221889 389 ntBASIC7.31□□□□□ -1.24
Vps53Q8CCB4 CT025525.1-201ENSMUST00000226325 1054 ntBASIC7.31□□□□□ -1.24
Vps53Q8CCB4 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Lrrc51-201ENSMUST00000078448 873 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Gm8526-201ENSMUST00000079153 475 ntBASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Gm10221-201ENSMUST00000088299 309 ntBASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Vps53Q8CCB4 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Gm9314-201ENSMUST00000199881 1528 ntBASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Kcnmb2-202ENSMUST00000119970 2919 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Gm18796-201ENSMUST00000190440 1767 ntBASIC7.31□□□□□ -1.24
Vps53Q8CCB4 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm4787-201ENSMUST00000062182 2474 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Klhl24-201ENSMUST00000023509 6683 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm12794-201ENSMUST00000052027 1452 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Mir99ahg-214ENSMUST00000183333 3422 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm43216-201ENSMUST00000196295 1333 ntBASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Vcan-203ENSMUST00000109546 12427 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm44530-201ENSMUST00000207920 3559 ntBASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Igkv9-120-201ENSMUST00000103316 353 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Mup6-202ENSMUST00000107520 540 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm16149-201ENSMUST00000117631 309 ntBASIC7.3□□□□□ -1.24
Vps53Q8CCB4 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm13702-201ENSMUST00000118542 825 ntBASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm12813-201ENSMUST00000119615 902 ntBASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm13460-201ENSMUST00000121274 353 ntBASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm23259-201ENSMUST00000158318 303 ntBASIC7.3□□□□□ -1.24
Vps53Q8CCB4 B230118H07Rik-208ENSMUST00000160037 1139 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm7152-201ENSMUST00000163570 605 ntBASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Speer4c-202ENSMUST00000179506 480 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm26974-201ENSMUST00000182054 875 ntTSL 2 BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm28438-201ENSMUST00000188299 345 ntBASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm38084-201ENSMUST00000193488 437 ntTSL 5 BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm37072-201ENSMUST00000194570 837 ntBASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm37865-201ENSMUST00000194996 437 ntTSL 5 BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm44225-201ENSMUST00000203582 186 ntBASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm3266-201ENSMUST00000217832 591 ntBASIC7.3□□□□□ -1.24
Vps53Q8CCB4 AC121804.1-201ENSMUST00000221016 394 ntBASIC7.3□□□□□ -1.24
Vps53Q8CCB4 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 AC165260.1-201ENSMUST00000224127 683 ntBASIC7.3□□□□□ -1.24
Vps53Q8CCB4 AC161252.1-201ENSMUST00000225536 467 ntBASIC7.3□□□□□ -1.24
Vps53Q8CCB4 AC154795.1-201ENSMUST00000225611 364 ntBASIC7.3□□□□□ -1.24
Vps53Q8CCB4 AC120375.2-202ENSMUST00000228722 397 ntBASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm22126-201ENSMUST00000083244 142 ntBASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm44229-201ENSMUST00000203211 2487 ntBASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Cdh9-202ENSMUST00000228307 3539 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm40770-201ENSMUST00000220040 1502 ntTSL 5 BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Vmn2r-ps44-201ENSMUST00000174053 2412 ntBASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm42479-201ENSMUST00000198654 1356 ntBASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Vps53Q8CCB4 Gm37876-201ENSMUST00000194490 1591 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Gm28240-201ENSMUST00000187560 2053 ntBASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Vmn1r220-203ENSMUST00000227679 7868 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Vmn1r220-206ENSMUST00000228854 7854 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Nt5c3-202ENSMUST00000101367 1519 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
Vps53Q8CCB4 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Gm12937-201ENSMUST00000118333 448 ntBASIC7.29□□□□□ -1.24
Vps53Q8CCB4 Gm12099-201ENSMUST00000118660 750 ntBASIC7.29□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms