Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm28548-201ENSMUST00000191599 409 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm38301-201ENSMUST00000195573 543 ntBASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm37555-201ENSMUST00000195711 542 ntTSL 5 BASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm43218-201ENSMUST00000196275 344 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm43538-201ENSMUST00000200416 849 ntTSL 3 BASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm36241-201ENSMUST00000201085 493 ntTSL 3 BASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm42786-201ENSMUST00000202357 280 ntBASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm7384-201ENSMUST00000203682 530 ntBASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm44159-201ENSMUST00000204065 442 ntBASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm45023-201ENSMUST00000207951 379 ntBASIC9.05□□□□□ -0.96
Trim35Q8C006 4933439N14Rik-201ENSMUST00000211062 1087 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm8423-201ENSMUST00000211387 607 ntBASIC9.05□□□□□ -0.96
Trim35Q8C006 AC164092.2-201ENSMUST00000214808 753 ntTSL 3 BASIC9.05□□□□□ -0.96
Trim35Q8C006 CT010455.1-201ENSMUST00000218579 413 ntBASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm21321-201ENSMUST00000220179 446 ntBASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm7768-201ENSMUST00000222988 597 ntBASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm13178-201ENSMUST00000036876 1227 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Trim35Q8C006 Morn3-202ENSMUST00000045843 904 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Itgb2l-202ENSMUST00000113773 2806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm5134-201ENSMUST00000099577 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Ehmt1-201ENSMUST00000046227 4554 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Trim35Q8C006 Egflam-202ENSMUST00000096494 4391 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Pknox1-201ENSMUST00000097352 4172 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Trim35Q8C006 AC129308.1-201ENSMUST00000223800 2309 ntBASIC9.05□□□□□ -0.96
Trim35Q8C006 4921521D15Rik-201ENSMUST00000197578 1927 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm7389-201ENSMUST00000181162 2884 ntBASIC9.05□□□□□ -0.96
Trim35Q8C006 Coa7-202ENSMUST00000131656 3714 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Gm16291-201ENSMUST00000147378 2594 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Prom1-214ENSMUST00000197706 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Ccdc159-201ENSMUST00000006403 1531 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 9430007A20Rik-201ENSMUST00000030328 1406 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Pabpc6-201ENSMUST00000057190 3208 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Trim35Q8C006 Slc38a1-203ENSMUST00000100262 7752 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Daam1-202ENSMUST00000221317 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Gbp11-202ENSMUST00000171587 1329 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Trim35Q8C006 Sdad1-203ENSMUST00000201143 2156 ntAPPRIS ALT1 TSL 5 BASIC9.05□□□□□ -0.96
Trim35Q8C006 Olfr272-203ENSMUST00000213989 1973 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Trim35Q8C006 Nbr1-207ENSMUST00000107218 3353 ntAPPRIS P3 TSL 5 BASIC9.04□□□□□ -0.96
Trim35Q8C006 Lrrc74a-204ENSMUST00000223308 1854 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm3182-201ENSMUST00000167902 1753 ntAPPRIS P5 TSL 5 BASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm8246-202ENSMUST00000180788 1753 ntAPPRIS P5 TSL 5 BASIC9.04□□□□□ -0.96
Trim35Q8C006 Morc2b-201ENSMUST00000053896 3712 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm42907-201ENSMUST00000199793 2148 ntBASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm45515-201ENSMUST00000210796 2141 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trim35Q8C006 Kin-201ENSMUST00000042512 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim35Q8C006 Flnb-201ENSMUST00000052678 9100 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Trim35Q8C006 Xpnpep3-201ENSMUST00000041609 3236 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm26902-201ENSMUST00000181307 3100 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trim35Q8C006 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Trim35Q8C006 Kcnab2-205ENSMUST00000159840 3574 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim35Q8C006 Pde7b-201ENSMUST00000020165 4137 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim35Q8C006 Cd36-201ENSMUST00000082367 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim35Q8C006 Pes1-202ENSMUST00000109985 2923 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Trim35Q8C006 Pes1-201ENSMUST00000020705 2911 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm24867-201ENSMUST00000104161 107 ntBASIC9.04□□□□□ -0.96
Trim35Q8C006 Cacfd1-201ENSMUST00000114003 727 ntTSL 3 BASIC9.04□□□□□ -0.96
Trim35Q8C006 Usp17le-ps-201ENSMUST00000117954 957 ntBASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm14663-201ENSMUST00000118474 1153 ntBASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm12871-201ENSMUST00000118758 438 ntBASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm6829-201ENSMUST00000119858 360 ntBASIC9.04□□□□□ -0.96
Trim35Q8C006 Olfr271-ps1-201ENSMUST00000121614 952 ntBASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm13071-201ENSMUST00000122237 376 ntBASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm11916-201ENSMUST00000132759 650 ntTSL 2 BASIC9.04□□□□□ -0.96
Trim35Q8C006 4930555B12Rik-201ENSMUST00000135444 283 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm12962-201ENSMUST00000138697 580 ntTSL 2 BASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm7613-201ENSMUST00000139070 487 ntBASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm22384-201ENSMUST00000158187 104 ntBASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm25051-201ENSMUST00000158602 249 ntBASIC9.04□□□□□ -0.96
Trim35Q8C006 Ighv5-8-201ENSMUST00000166255 278 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Trim35Q8C006 Pdzk1ip1-207ENSMUST00000171877 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim35Q8C006 Pdzk1ip1-208ENSMUST00000177647 826 ntAPPRIS P3 TSL 3 BASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm4845-201ENSMUST00000179202 562 ntBASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm19872-201ENSMUST00000183446 687 ntTSL 2 BASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm10637-201ENSMUST00000183718 828 ntTSL 3 BASIC9.04□□□□□ -0.96
Trim35Q8C006 Gpihbp1-204ENSMUST00000189944 466 ntTSL 2 BASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm28921-201ENSMUST00000190219 378 ntBASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm37801-201ENSMUST00000194754 274 ntBASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm43689-201ENSMUST00000195951 427 ntBASIC9.04□□□□□ -0.96
Trim35Q8C006 Ass-ps1-201ENSMUST00000197717 761 ntBASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm17977-201ENSMUST00000198743 574 ntBASIC9.04□□□□□ -0.96
Trim35Q8C006 Tgif1-ps-201ENSMUST00000201864 736 ntBASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm45042-201ENSMUST00000207377 211 ntBASIC9.04□□□□□ -0.96
Trim35Q8C006 1700019A23Rik-201ENSMUST00000208842 196 ntBASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm18641-201ENSMUST00000211763 1246 ntBASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm39384-201ENSMUST00000213703 743 ntTSL 5 BASIC9.04□□□□□ -0.96
Trim35Q8C006 Olfr271-ps1-202ENSMUST00000217546 852 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Trim35Q8C006 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm5176-202ENSMUST00000220267 583 ntBASIC9.04□□□□□ -0.96
Trim35Q8C006 AC164561.1-201ENSMUST00000220414 115 ntBASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm35890-201ENSMUST00000221195 564 ntTSL 5 BASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm21937-201ENSMUST00000222825 218 ntBASIC9.04□□□□□ -0.96
Trim35Q8C006 AC090654.1-201ENSMUST00000225584 1071 ntBASIC9.04□□□□□ -0.96
Trim35Q8C006 Ppp1r1c-201ENSMUST00000040863 629 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Trim35Q8C006 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm22974-201ENSMUST00000083301 103 ntBASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm5121-201ENSMUST00000085711 627 ntBASIC9.04□□□□□ -0.96
Trim35Q8C006 Defa30-201ENSMUST00000098898 398 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Trim35Q8C006 CT030159.1-201ENSMUST00000221580 2261 ntBASIC9.04□□□□□ -0.96
Trim35Q8C006 Gm15066-201ENSMUST00000120163 2608 ntBASIC9.04□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 97.6 ms