Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm8855-201ENSMUST00000118888 878 ntBASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Gm15502-201ENSMUST00000121449 208 ntBASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Vmn1r239-ps-201ENSMUST00000127465 960 ntBASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Gm11962-201ENSMUST00000145746 255 ntBASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Gm14507-201ENSMUST00000156169 347 ntTSL 2 BASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Gm12963-203ENSMUST00000156271 388 ntTSL 5 BASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Gm23343-201ENSMUST00000158964 143 ntBASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Gm26671-201ENSMUST00000180423 1157 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Gm27804-201ENSMUST00000185135 119 ntBASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Rd3l-203ENSMUST00000189759 1427 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Gm37883-201ENSMUST00000194970 725 ntBASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Gm43719-201ENSMUST00000200088 2199 ntBASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Gm3321-201ENSMUST00000200603 1129 ntBASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Gm45405-201ENSMUST00000211544 609 ntBASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 AC122295.1-201ENSMUST00000223476 388 ntBASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 AC136376.1-201ENSMUST00000228496 950 ntBASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Gm26893-202ENSMUST00000180965 2079 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Gm26552-202ENSMUST00000180980 2079 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Gm37951-201ENSMUST00000192963 3032 ntBASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Vmn2r107-201ENSMUST00000042090 2586 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Gm43612-201ENSMUST00000196087 3207 ntBASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
Ccdc40Q8BI79 Serpinb3b-201ENSMUST00000086694 1653 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Itih4-203ENSMUST00000120269 3531 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Pot1a-201ENSMUST00000115327 2447 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Stk32a-201ENSMUST00000045477 3765 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Vmn2r42-201ENSMUST00000086282 3623 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Lrrc51-205ENSMUST00000106965 743 ntTSL 3 BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Gm12565-201ENSMUST00000119004 649 ntBASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Chchd7-204ENSMUST00000119403 695 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Gm14863-201ENSMUST00000119648 307 ntBASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Gm12005-201ENSMUST00000121451 379 ntBASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Gm22604-201ENSMUST00000157604 311 ntBASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Gm25989-201ENSMUST00000158761 133 ntBASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Gm29082-201ENSMUST00000185207 448 ntTSL 5 BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Gm29060-201ENSMUST00000185339 457 ntTSL 5 BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Gm28887-201ENSMUST00000186065 294 ntTSL 5 BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Gm28664-201ENSMUST00000186118 457 ntTSL 5 BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Gm28817-201ENSMUST00000187598 830 ntTSL 5 BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Stk-ps2-204ENSMUST00000187808 616 ntBASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Gm29209-201ENSMUST00000188176 457 ntTSL 5 BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Gm29090-201ENSMUST00000188526 457 ntTSL 5 BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Gm43786-202ENSMUST00000202157 616 ntTSL 3 BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Gm44856-201ENSMUST00000206639 304 ntBASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 CT485607.3-201ENSMUST00000213361 672 ntBASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 AC114008.1-201ENSMUST00000226193 937 ntBASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 AC167013.4-201ENSMUST00000226712 317 ntBASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Sntn-201ENSMUST00000061045 1240 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Gm29486-201ENSMUST00000088648 372 ntBASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Gm28472-202ENSMUST00000190133 1499 ntTSL 5 BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Gm28789-202ENSMUST00000190429 1499 ntTSL 5 BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 AC164092.3-201ENSMUST00000216970 1323 ntBASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Tmprss11f-201ENSMUST00000116553 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Olfr1474-203ENSMUST00000220113 1539 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
Ccdc40Q8BI79 Gm42658-201ENSMUST00000197199 1575 ntBASIC6.44□□□□□ -1.38
Ccdc40Q8BI79 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Ccdc40Q8BI79 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Ccdc40Q8BI79 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
Ccdc40Q8BI79 Armc4-201ENSMUST00000081275 3477 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Ccdc40Q8BI79 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Ccdc40Q8BI79 Olfr10-202ENSMUST00000217290 2776 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Ccdc40Q8BI79 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Ccdc40Q8BI79 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Ccdc40Q8BI79 Gm11911-201ENSMUST00000117938 1023 ntBASIC6.44□□□□□ -1.38
Ccdc40Q8BI79 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
Ccdc40Q8BI79 Gm12115-201ENSMUST00000119969 447 ntBASIC6.44□□□□□ -1.38
Ccdc40Q8BI79 Gm11925-201ENSMUST00000121375 535 ntBASIC6.44□□□□□ -1.38
Ccdc40Q8BI79 Gm12101-201ENSMUST00000121590 390 ntBASIC6.44□□□□□ -1.38
Ccdc40Q8BI79 Gm5843-201ENSMUST00000121631 476 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 110.6 ms