Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 AC154642.1-201ENSMUST00000224173 740 ntBASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Gm8256-203ENSMUST00000228692 591 ntBASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Utp14b-201ENSMUST00000053760 7393 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Ttll6-202ENSMUST00000167258 3205 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Gm11242-201ENSMUST00000120103 2457 ntBASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 AC192333.5-201ENSMUST00000224620 2350 ntBASIC6.49□□□□□ -1.37
Upf3bQ3ULL6 Gm45762-201ENSMUST00000212863 2619 ntBASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Usp17lc-202ENSMUST00000106892 2403 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Cdh8-201ENSMUST00000093249 3790 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Gm43611-201ENSMUST00000196656 4352 ntBASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Gm26144-201ENSMUST00000104475 132 ntBASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Swi5-204ENSMUST00000113400 522 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Gm13114-201ENSMUST00000117605 106 ntBASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Gm13835-201ENSMUST00000118459 685 ntBASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Gm11624-201ENSMUST00000118579 1041 ntBASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Gm25117-201ENSMUST00000157194 144 ntBASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Gm26167-201ENSMUST00000158423 253 ntBASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Ptpn4-204ENSMUST00000163621 431 ntTSL 3 BASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Vmn1r-ps80-201ENSMUST00000174838 966 ntBASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Gm29519-201ENSMUST00000186994 398 ntBASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Gm19087-201ENSMUST00000191430 946 ntBASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 4933436F18Rik-201ENSMUST00000193468 802 ntBASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Fxyd4-207ENSMUST00000204214 550 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Gm4083-201ENSMUST00000207158 451 ntBASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Gm44809-201ENSMUST00000208305 993 ntBASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 BC024386-205ENSMUST00000210080 731 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Gm18851-201ENSMUST00000210087 1058 ntBASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Gm9088-201ENSMUST00000220237 508 ntBASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 AC126685.1-201ENSMUST00000221001 121 ntBASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 AC131187.2-201ENSMUST00000223936 994 ntBASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 AC091783.2-201ENSMUST00000224626 740 ntBASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 4930550C14Rik-201ENSMUST00000005262 1237 ntAPPRIS P2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Olfr726-201ENSMUST00000072370 966 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Olfr166-201ENSMUST00000074739 1040 ntAPPRIS P1 BASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Grin2b-201ENSMUST00000053880 24060 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Gm45633-201ENSMUST00000210669 3253 ntBASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Gm44102-201ENSMUST00000204031 1666 ntBASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Ect2-203ENSMUST00000108300 4086 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Pou2f1-205ENSMUST00000111427 13050 ntAPPRIS ALT2 TSL 2 BASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Gm1966-201ENSMUST00000184540 7293 ntBASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Nlrp1b-204ENSMUST00000108516 4134 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
Upf3bQ3ULL6 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 AC121960.2-201ENSMUST00000227349 3446 ntBASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 AC158605.3-201ENSMUST00000218999 2538 ntBASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Ktn1-223ENSMUST00000190999 4031 ntAPPRIS ALT2 TSL 5 BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Olfr132-202ENSMUST00000216804 1913 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Gm26984-201ENSMUST00000182345 3510 ntBASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Nlrp1a-201ENSMUST00000048514 3903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Vmn1r201-203ENSMUST00000226965 4741 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Zbbx-204ENSMUST00000107778 2467 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Gm15332-201ENSMUST00000118386 357 ntBASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Gm15634-201ENSMUST00000147206 492 ntTSL 3 BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Gm25065-201ENSMUST00000177914 132 ntBASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Gm25891-201ENSMUST00000180050 132 ntBASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Gm5430-201ENSMUST00000182525 915 ntBASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 A630095E13Rik-202ENSMUST00000184611 536 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 D3Ertd751e-212ENSMUST00000194346 744 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Gm38343-201ENSMUST00000195786 1060 ntTSL 5 BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Gm44199-201ENSMUST00000205219 739 ntTSL 3 BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Gm45241-201ENSMUST00000211237 634 ntTSL 5 BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Olfr1084-201ENSMUST00000216851 961 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Gm18405-201ENSMUST00000220743 511 ntBASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 AC159208.1-201ENSMUST00000221403 649 ntBASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 AC161252.1-201ENSMUST00000225536 467 ntBASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Gm5229-201ENSMUST00000039375 354 ntBASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Olfr965-201ENSMUST00000069342 939 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Nms-201ENSMUST00000088029 1001 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Pum2-204ENSMUST00000163569 3560 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
Upf3bQ3ULL6 Gm37897-201ENSMUST00000192613 3561 ntBASIC6.47□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms