Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Calcrl-201ENSMUST00000074262 4882 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Mipol1-208ENSMUST00000153137 2158 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Klrb1f-201ENSMUST00000032257 1701 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm26078-201ENSMUST00000104067 128 ntBASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm23031-201ENSMUST00000157998 119 ntBASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm17142-201ENSMUST00000164933 645 ntBASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 4930445N18Rik-201ENSMUST00000180631 886 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm27887-201ENSMUST00000184367 102 ntBASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Epgn-202ENSMUST00000202724 805 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Olfr1494-202ENSMUST00000207836 2100 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Cbx3-ps4-201ENSMUST00000091531 549 ntBASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm9894-201ENSMUST00000171257 2904 ntBASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm37169-201ENSMUST00000195599 4161 ntBASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm340-201ENSMUST00000172371 3729 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Olfr472-203ENSMUST00000216937 5392 ntAPPRIS P1 TSL 3 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Tdrd7-202ENSMUST00000107777 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm44723-201ENSMUST00000207369 4000 ntBASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Lama2-201ENSMUST00000092639 9614 ntAPPRIS P1 TSL 5 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Dnah10-201ENSMUST00000058440 14038 ntAPPRIS P2 TSL 5 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm28278-201ENSMUST00000185603 1499 ntTSL 5 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm28279-201ENSMUST00000186248 1493 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm28491-202ENSMUST00000186902 1493 ntTSL 5 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm29368-201ENSMUST00000187201 1489 ntTSL 5 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm28088-202ENSMUST00000187402 1493 ntTSL 5 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm28674-201ENSMUST00000187502 1493 ntTSL 5 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm28131-203ENSMUST00000187841 1493 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm28487-202ENSMUST00000187894 1493 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm29056-201ENSMUST00000187933 1493 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm29074-203ENSMUST00000188026 1493 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm28754-201ENSMUST00000188778 1493 ntTSL 5 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm28520-202ENSMUST00000189379 1493 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm29275-202ENSMUST00000189475 1494 ntTSL 5 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm28963-202ENSMUST00000189567 1493 ntTSL 5 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm28519-203ENSMUST00000190126 1493 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm29207-202ENSMUST00000190931 1493 ntTSL 5 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm28310-202ENSMUST00000191136 1493 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm29646-202ENSMUST00000191146 1493 ntTSL 5 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm28762-203ENSMUST00000191259 1493 ntTSL 1 (best) BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm28691-202ENSMUST00000191561 1493 ntTSL 5 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Gm38174-201ENSMUST00000191787 1494 ntTSL 5 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Dnah17-204ENSMUST00000132685 13612 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Mlip-215ENSMUST00000185144 2921 ntAPPRIS ALT2 TSL 5 BASIC8.13□□□□□ -1.11
Sf3b2Q3UJB0 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 Phactr2-204ENSMUST00000105546 2808 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 Olfr457-202ENSMUST00000203396 4404 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 Gm37403-201ENSMUST00000193775 3521 ntBASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 Gm12287-201ENSMUST00000119770 707 ntBASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 Gm14331-201ENSMUST00000120396 409 ntBASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 Pard3bos2-201ENSMUST00000127498 770 ntTSL 3 BASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 Gm24741-201ENSMUST00000158857 106 ntBASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 Gm3307-201ENSMUST00000176164 632 ntBASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 Gm43631-201ENSMUST00000202011 369 ntBASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 Gm44683-201ENSMUST00000209088 484 ntBASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 AC117769.2-201ENSMUST00000224612 469 ntBASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 CT025667.1-201ENSMUST00000225872 382 ntBASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 Olfr1016-201ENSMUST00000099915 930 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 Ms4a1-201ENSMUST00000169159 3075 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 Zfp729a-201ENSMUST00000012314 9455 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 Nckap5-204ENSMUST00000112583 7212 ntAPPRIS P3 TSL 5 BASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 Maml2-201ENSMUST00000034401 2098 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 Vangl1-202ENSMUST00000159388 3207 ntTSL 5 BASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 Gramd1c-203ENSMUST00000179565 3159 ntTSL 5 BASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 Gm38414-202ENSMUST00000211253 1405 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Sf3b2Q3UJB0 AC140299.2-201ENSMUST00000219546 1969 ntBASIC8.11□□□□□ -1.11
Sf3b2Q3UJB0 Gm13854-201ENSMUST00000121183 1679 ntBASIC8.11□□□□□ -1.11
Sf3b2Q3UJB0 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Sf3b2Q3UJB0 AC161884.1-201ENSMUST00000225436 2174 ntBASIC8.11□□□□□ -1.11
Sf3b2Q3UJB0 Dnajc15-202ENSMUST00000226459 6193 ntAPPRIS P1 BASIC8.11□□□□□ -1.11
Sf3b2Q3UJB0 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Sf3b2Q3UJB0 Ssmem1-201ENSMUST00000031797 1340 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Sf3b2Q3UJB0 Gm37238-201ENSMUST00000195552 2390 ntBASIC8.11□□□□□ -1.11
Sf3b2Q3UJB0 Gm3608-201ENSMUST00000086725 2858 ntBASIC8.11□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 70.6 ms