Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Halr1-201ENSMUST00000125374 391 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Scn1bP97952 1700073E17Rik-203ENSMUST00000148424 741 ntBASIC5.63□□□□□ -1.51
Scn1bP97952 Gm25669-201ENSMUST00000157699 112 ntBASIC5.63□□□□□ -1.51
Scn1bP97952 Gm16113-201ENSMUST00000159629 372 ntBASIC5.63□□□□□ -1.51
Scn1bP97952 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Scn1bP97952 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Scn1bP97952 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Scn1bP97952 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC5.63□□□□□ -1.51
Scn1bP97952 Gm18833-201ENSMUST00000173218 862 ntBASIC5.63□□□□□ -1.51
Scn1bP97952 Gm27617-201ENSMUST00000184321 168 ntBASIC5.63□□□□□ -1.51
Scn1bP97952 Gm27866-201ENSMUST00000184459 171 ntBASIC5.63□□□□□ -1.51
Scn1bP97952 Gm9999-202ENSMUST00000185832 335 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Scn1bP97952 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Scn1bP97952 Gm18849-201ENSMUST00000189861 560 ntBASIC5.63□□□□□ -1.51
Scn1bP97952 1700123O21Rik-201ENSMUST00000190515 677 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Scn1bP97952 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC5.63□□□□□ -1.51
Scn1bP97952 Gm37741-201ENSMUST00000191768 1256 ntBASIC5.63□□□□□ -1.51
Scn1bP97952 Gm19057-201ENSMUST00000194329 1197 ntBASIC5.63□□□□□ -1.51
Scn1bP97952 Gm43048-201ENSMUST00000196101 388 ntBASIC5.63□□□□□ -1.51
Scn1bP97952 Gm44342-201ENSMUST00000196874 129 ntBASIC5.63□□□□□ -1.51
Scn1bP97952 Gm44383-201ENSMUST00000198940 129 ntBASIC5.63□□□□□ -1.51
Scn1bP97952 AC099934.1-201ENSMUST00000200493 79 ntBASIC5.63□□□□□ -1.51
Scn1bP97952 Gm4290-201ENSMUST00000206897 814 ntBASIC5.63□□□□□ -1.51
Scn1bP97952 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Scn1bP97952 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC5.63□□□□□ -1.51
Scn1bP97952 Gm2975-201ENSMUST00000209710 820 ntBASIC5.63□□□□□ -1.51
Scn1bP97952 Gm6145-202ENSMUST00000210292 787 ntTSL 5 BASIC5.63□□□□□ -1.51
Scn1bP97952 Gm19056-201ENSMUST00000218220 797 ntBASIC5.63□□□□□ -1.51
Scn1bP97952 Gm35619-201ENSMUST00000222548 600 ntBASIC5.63□□□□□ -1.51
Scn1bP97952 AC125064.1-201ENSMUST00000225801 295 ntBASIC5.63□□□□□ -1.51
Scn1bP97952 AC164597.1-201ENSMUST00000226538 514 ntBASIC5.63□□□□□ -1.51
Scn1bP97952 Olfr1451-201ENSMUST00000063144 933 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Scn1bP97952 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Scn1bP97952 Klra2-202ENSMUST00000088867 1132 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Scn1bP97952 Smad2-203ENSMUST00000113930 1305 ntTSL 5 BASIC5.63□□□□□ -1.51
Scn1bP97952 AC163296.2-201ENSMUST00000220177 1315 ntBASIC5.63□□□□□ -1.51
Scn1bP97952 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Scn1bP97952 Plxna4os2-201ENSMUST00000152538 2044 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Scn1bP97952 Impact-201ENSMUST00000025290 3432 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Scn1bP97952 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Scn1bP97952 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Scn1bP97952 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC5.63□□□□□ -1.51
Scn1bP97952 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
Scn1bP97952 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Scn1bP97952 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Scn1bP97952 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC5.63□□□□□ -1.51
Scn1bP97952 Usp29-203ENSMUST00000198068 4420 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Scn1bP97952 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Scn1bP97952 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scn1bP97952 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Scn1bP97952 Trav6-2-201ENSMUST00000103573 338 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Scn1bP97952 Homer1-209ENSMUST00000109496 772 ntTSL 5 BASIC5.62□□□□□ -1.51
Scn1bP97952 Gm11864-201ENSMUST00000116179 1220 ntBASIC5.62□□□□□ -1.51
Scn1bP97952 Gm14904-201ENSMUST00000117067 335 ntBASIC5.62□□□□□ -1.51
Scn1bP97952 Gm4910-201ENSMUST00000119605 366 ntBASIC5.62□□□□□ -1.51
Scn1bP97952 Cox7c-203ENSMUST00000131011 540 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scn1bP97952 Gm13746-201ENSMUST00000133981 605 ntTSL 3 BASIC5.62□□□□□ -1.51
Scn1bP97952 AI662270-203ENSMUST00000145461 592 ntTSL 5 BASIC5.62□□□□□ -1.51
Scn1bP97952 Gm4997-201ENSMUST00000154056 360 ntBASIC5.62□□□□□ -1.51
Scn1bP97952 Gm24176-201ENSMUST00000158928 121 ntBASIC5.62□□□□□ -1.51
Scn1bP97952 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Scn1bP97952 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Scn1bP97952 Tph1-205ENSMUST00000168335 578 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Scn1bP97952 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Scn1bP97952 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Scn1bP97952 Vmn1r-ps77-201ENSMUST00000174184 921 ntBASIC5.62□□□□□ -1.51
Scn1bP97952 Vmn1r-ps28-201ENSMUST00000174767 942 ntBASIC5.62□□□□□ -1.51
Scn1bP97952 Mir5128-201ENSMUST00000175217 84 ntBASIC5.62□□□□□ -1.51
Scn1bP97952 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Scn1bP97952 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Scn1bP97952 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Scn1bP97952 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Scn1bP97952 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC5.62□□□□□ -1.51
Scn1bP97952 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Scn1bP97952 Zfp87-202ENSMUST00000181341 480 ntTSL 3 BASIC5.62□□□□□ -1.51
Scn1bP97952 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Scn1bP97952 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Scn1bP97952 Gm28580-201ENSMUST00000186767 88 ntBASIC5.62□□□□□ -1.51
Scn1bP97952 Gm35323-201ENSMUST00000191836 499 ntBASIC5.62□□□□□ -1.51
Scn1bP97952 1700094M23Rik-202ENSMUST00000198047 675 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Scn1bP97952 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC5.62□□□□□ -1.51
Scn1bP97952 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scn1bP97952 Gm19201-201ENSMUST00000210127 778 ntBASIC5.62□□□□□ -1.51
Scn1bP97952 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC5.62□□□□□ -1.51
Scn1bP97952 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC5.62□□□□□ -1.51
Scn1bP97952 Gm32235-202ENSMUST00000220286 898 ntTSL 5 BASIC5.62□□□□□ -1.51
Scn1bP97952 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC5.62□□□□□ -1.51
Scn1bP97952 Gm34165-201ENSMUST00000222012 1174 ntBASIC5.62□□□□□ -1.51
Scn1bP97952 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC5.62□□□□□ -1.51
Scn1bP97952 Smim15-204ENSMUST00000224390 645 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Scn1bP97952 AC138329.1-201ENSMUST00000225040 471 ntBASIC5.62□□□□□ -1.51
Scn1bP97952 9530002B09Rik-201ENSMUST00000024032 803 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scn1bP97952 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scn1bP97952 Olfr955-201ENSMUST00000073946 945 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
Scn1bP97952 Ifitm6-201ENSMUST00000081924 663 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Scn1bP97952 Gm11342-203ENSMUST00000224879 1324 ntBASIC5.62□□□□□ -1.51
Scn1bP97952 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.62□□□□□ -1.51
Scn1bP97952 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Scn1bP97952 Olfr916-202ENSMUST00000213714 1380 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Scn1bP97952 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 66.3 ms