Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm7713-201ENSMUST00000181201 1007 ntBASIC5.93□□□□□ -1.46
Sox3P53784 Mir6348-201ENSMUST00000183804 120 ntBASIC5.93□□□□□ -1.46
Sox3P53784 Gm28610-201ENSMUST00000187716 406 ntTSL 2 BASIC5.93□□□□□ -1.46
Sox3P53784 Gm37610-201ENSMUST00000191867 620 ntTSL 3 BASIC5.93□□□□□ -1.46
Sox3P53784 Gm44225-201ENSMUST00000203582 186 ntBASIC5.93□□□□□ -1.46
Sox3P53784 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC5.93□□□□□ -1.46
Sox3P53784 Gm17918-201ENSMUST00000205315 574 ntBASIC5.93□□□□□ -1.46
Sox3P53784 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC5.93□□□□□ -1.46
Sox3P53784 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC5.93□□□□□ -1.46
Sox3P53784 AC241534.1-201ENSMUST00000218537 399 ntTSL 2 BASIC5.93□□□□□ -1.46
Sox3P53784 Olfr1126-201ENSMUST00000071355 945 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Sox3P53784 n-R5s56-201ENSMUST00000082521 105 ntBASIC5.93□□□□□ -1.46
Sox3P53784 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Sox3P53784 Defa36-201ENSMUST00000095424 420 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox3P53784 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox3P53784 Gm10799-201ENSMUST00000099666 312 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Sox3P53784 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sox3P53784 Morc2b-202ENSMUST00000131954 3857 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
Sox3P53784 Gm36888-201ENSMUST00000195819 2945 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sox3P53784 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Sox3P53784 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox3P53784 Clock-205ENSMUST00000202651 9744 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
Sox3P53784 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Sox3P53784 Specc1-217ENSMUST00000202905 3841 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Sox3P53784 Gm33326-201ENSMUST00000209741 3815 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sox3P53784 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox3P53784 Pcdh15-204ENSMUST00000105426 6802 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
Sox3P53784 Gm29438-201ENSMUST00000191298 2613 ntBASIC5.93□□□□□ -1.46
Sox3P53784 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sox3P53784 Add3-201ENSMUST00000025999 4334 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
Sox3P53784 Bnip3l-202ENSMUST00000111115 3259 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Sox3P53784 Olfr619-202ENSMUST00000215732 1370 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
Sox3P53784 Gm36947-201ENSMUST00000194709 2249 ntBASIC5.93□□□□□ -1.46
Sox3P53784 Oxgr1-201ENSMUST00000058213 3732 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sox3P53784 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sox3P53784 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sox3P53784 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox3P53784 Alcam-203ENSMUST00000164728 1885 ntTSL 5 BASIC5.92□□□□□ -1.46
Sox3P53784 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC5.92□□□□□ -1.46
Sox3P53784 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Sox3P53784 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sox3P53784 9330178D15Rik-201ENSMUST00000196033 3451 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox3P53784 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC5.92□□□□□ -1.46
Sox3P53784 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox3P53784 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Sox3P53784 Ear1-201ENSMUST00000100691 713 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sox3P53784 Gm12447-201ENSMUST00000119110 470 ntBASIC5.92□□□□□ -1.46
Sox3P53784 Gm22312-201ENSMUST00000158005 130 ntBASIC5.92□□□□□ -1.46
Sox3P53784 Gm25603-201ENSMUST00000158361 105 ntBASIC5.92□□□□□ -1.46
Sox3P53784 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC5.92□□□□□ -1.46
Sox3P53784 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC5.92□□□□□ -1.46
Sox3P53784 Znrf1-215ENSMUST00000174454 494 ntTSL 3 BASIC5.92□□□□□ -1.46
Sox3P53784 Gm22690-201ENSMUST00000175054 110 ntBASIC5.92□□□□□ -1.46
Sox3P53784 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC5.92□□□□□ -1.46
Sox3P53784 Gm29650-201ENSMUST00000188485 742 ntBASIC5.92□□□□□ -1.46
Sox3P53784 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC5.92□□□□□ -1.46
Sox3P53784 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sox3P53784 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC5.92□□□□□ -1.46
Sox3P53784 Gm3544-201ENSMUST00000196129 305 ntBASIC5.92□□□□□ -1.46
Sox3P53784 Gm43390-201ENSMUST00000196614 421 ntBASIC5.92□□□□□ -1.46
Sox3P53784 Gm43724-201ENSMUST00000197516 226 ntBASIC5.92□□□□□ -1.46
Sox3P53784 Gm43794-201ENSMUST00000200971 692 ntBASIC5.92□□□□□ -1.46
Sox3P53784 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
Sox3P53784 Gm19033-201ENSMUST00000208516 964 ntBASIC5.92□□□□□ -1.46
Sox3P53784 Gm18914-201ENSMUST00000214625 616 ntBASIC5.92□□□□□ -1.46
Sox3P53784 AC153943.1-201ENSMUST00000219312 256 ntBASIC5.92□□□□□ -1.46
Sox3P53784 CT010456.3-201ENSMUST00000221210 523 ntTSL 5 BASIC5.92□□□□□ -1.46
Sox3P53784 Olfr365-201ENSMUST00000074168 939 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Sox3P53784 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sox3P53784 Slc39a12-201ENSMUST00000082290 2675 ntAPPRIS P2 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sox3P53784 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Sox3P53784 Xpo7-203ENSMUST00000226448 3663 ntBASIC5.92□□□□□ -1.46
Sox3P53784 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Sox3P53784 Mfsd4b4-201ENSMUST00000178045 3508 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
Sox3P53784 Fmn1-202ENSMUST00000099576 11817 ntAPPRIS ALT2 TSL 5 BASIC5.92□□□□□ -1.46
Sox3P53784 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Sox3P53784 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
Sox3P53784 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
Sox3P53784 Olfr1306-202ENSMUST00000214844 1893 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Sox3P53784 Pln-206ENSMUST00000220197 1854 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Sox3P53784 Cntn4-202ENSMUST00000089208 5179 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
Sox3P53784 Etv1-202ENSMUST00000159334 3981 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sox3P53784 Thnsl1-203ENSMUST00000102952 1679 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sox3P53784 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox3P53784 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox3P53784 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC5.91□□□□□ -1.46
Sox3P53784 Lrrc3b-202ENSMUST00000163937 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox3P53784 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox3P53784 Gm42994-201ENSMUST00000195964 2549 ntBASIC5.91□□□□□ -1.46
Sox3P53784 Gm21846-201ENSMUST00000179257 3073 ntBASIC5.91□□□□□ -1.46
Sox3P53784 Enpp2-201ENSMUST00000041591 3095 ntAPPRIS P3 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox3P53784 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC5.91□□□□□ -1.46
Sox3P53784 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC5.91□□□□□ -1.46
Sox3P53784 Gm12018-201ENSMUST00000150694 3375 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
Sox3P53784 Olfr1170-202ENSMUST00000214386 3355 ntAPPRIS P1 TSL 5 BASIC5.91□□□□□ -1.46
Sox3P53784 9430053O09Rik-201ENSMUST00000192654 2570 ntBASIC5.91□□□□□ -1.46
Sox3P53784 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC5.91□□□□□ -1.46
Sox3P53784 Gm6337-201ENSMUST00000168088 1758 ntAPPRIS P5 TSL 5 BASIC5.91□□□□□ -1.46
Sox3P53784 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC5.91□□□□□ -1.46
Sox3P53784 Pbrm1-202ENSMUST00000022474 4843 ntTSL 5 BASIC5.91□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 57 ms