Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Nkx2-1P50220 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Nkx2-1P50220 Gm11541-201ENSMUST00000069852 1681 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Nkx2-1P50220 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Nkx2-1P50220 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Nkx2-1P50220 Lmbrd2-201ENSMUST00000090380 3210 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Nkx2-1P50220 AC163731.1-201ENSMUST00000225696 3118 ntBASIC5.08□□□□□ -1.6
Nkx2-1P50220 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Olfr1380-202ENSMUST00000215360 2498 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gsdmc4-201ENSMUST00000063530 1988 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Casp1-201ENSMUST00000027015 1497 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Slfn8-206ENSMUST00000215239 2930 ntTSL 5 BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm3512-202ENSMUST00000172431 1861 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm45632-201ENSMUST00000211532 1888 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 Tbc1d23-203ENSMUST00000226586 3112 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Akap11-201ENSMUST00000022593 5688 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
Nkx2-1P50220 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm14610-201ENSMUST00000118358 966 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm9506-201ENSMUST00000118516 320 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm13444-201ENSMUST00000119445 522 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm11504-201ENSMUST00000120211 173 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm11255-201ENSMUST00000120448 1180 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm15171-201ENSMUST00000122191 334 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm15910-201ENSMUST00000127564 2971 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gtsf1-206ENSMUST00000146675 756 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm15401-203ENSMUST00000156497 378 ntTSL 3 BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm23897-201ENSMUST00000158110 158 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm25487-201ENSMUST00000158725 125 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm17202-201ENSMUST00000171723 951 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Raet1e-202ENSMUST00000178026 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm498-203ENSMUST00000179036 990 ntTSL 5 BASIC5.07□□□□□ -1.6
Nkx2-1P50220 4930532G15Rik-201ENSMUST00000180632 699 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx2-1P50220 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx2-1P50220 6530403H02Rik-203ENSMUST00000183168 843 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Mir6908-201ENSMUST00000184056 63 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Mir7005-201ENSMUST00000185089 69 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC5.07□□□□□ -1.6
Nkx2-1P50220 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm43561-201ENSMUST00000199866 448 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm36378-201ENSMUST00000201709 388 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm42963-201ENSMUST00000202943 1217 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm18012-201ENSMUST00000204558 773 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 Scp2-ps2-202ENSMUST00000213851 609 ntTSL 5 BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Olfr1245-201ENSMUST00000214870 1062 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm4042-201ENSMUST00000216946 637 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm19007-201ENSMUST00000217746 874 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm46311-201ENSMUST00000217971 203 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm9321-201ENSMUST00000221179 778 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC5.07□□□□□ -1.6
Nkx2-1P50220 AC153152.2-201ENSMUST00000223165 959 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 AC163667.1-201ENSMUST00000225201 1289 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 CT030238.3-201ENSMUST00000227352 875 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 Frg1-201ENSMUST00000033999 1039 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Olfr303-201ENSMUST00000053958 1040 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
Nkx2-1P50220 n-R5s180-201ENSMUST00000082770 106 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 Mir138-2-201ENSMUST00000083578 71 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 Zfp26-203ENSMUST00000159569 11276 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Ereg-201ENSMUST00000031324 4128 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm43981-201ENSMUST00000203285 1467 ntBASIC5.07□□□□□ -1.6
Nkx2-1P50220 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Nkx2-1P50220 Gm15478-201ENSMUST00000145914 2172 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Clec4e-201ENSMUST00000032239 2518 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx2-1P50220 A930017M01Rik-201ENSMUST00000081361 2884 ntBASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gm31121-201ENSMUST00000197948 1413 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Olfr1250-203ENSMUST00000215730 4632 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Mospd2-202ENSMUST00000112247 2479 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Setd2-201ENSMUST00000153838 8350 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Emsy-202ENSMUST00000205276 7693 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx2-1P50220 E330013P04Rik-201ENSMUST00000065383 2070 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Gm8177-201ENSMUST00000181591 1336 ntBASIC5.06□□□□□ -1.6
Nkx2-1P50220 Rbpj-202ENSMUST00000087360 5252 ntTSL 5 BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Nkx2-1P50220 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms