Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Rfx1P48377 Gm44695-201ENSMUST00000205567 1631 ntBASIC8.06□□□□□ -1.12
Rfx1P48377 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Rfx1P48377 Emsy-207ENSMUST00000205911 5079 ntTSL 5 BASIC8.06□□□□□ -1.12
Rfx1P48377 Olfr1047-202ENSMUST00000216056 2450 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
Rfx1P48377 Gm43314-201ENSMUST00000196744 2231 ntBASIC8.06□□□□□ -1.12
Rfx1P48377 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Rfx1P48377 Rfx4-205ENSMUST00000166696 3332 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Rfx1P48377 Gm7754-201ENSMUST00000223075 2064 ntBASIC8.06□□□□□ -1.12
Rfx1P48377 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Rfx1P48377 Tulp4-201ENSMUST00000039655 9687 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 Gm8734-201ENSMUST00000211669 1312 ntBASIC8.05□□□□□ -1.12
Rfx1P48377 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 AC121997.2-201ENSMUST00000228095 2294 ntBASIC8.05□□□□□ -1.12
Rfx1P48377 Pde1a-202ENSMUST00000102651 1673 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 Pde1a-201ENSMUST00000090756 1661 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Rfx1P48377 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 Polk-210ENSMUST00000222389 1404 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 Mef2c-223ENSMUST00000199105 4361 ntTSL 5 BASIC8.05□□□□□ -1.12
Rfx1P48377 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC8.05□□□□□ -1.12
Rfx1P48377 Tnr-202ENSMUST00000192069 12202 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Rfx1P48377 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Rfx1P48377 Esf1-201ENSMUST00000046030 3396 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 Hnf4g-202ENSMUST00000108394 2327 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Rfx1P48377 Gm12344-201ENSMUST00000117087 329 ntBASIC8.05□□□□□ -1.12
Rfx1P48377 Gm7803-201ENSMUST00000117176 1015 ntBASIC8.05□□□□□ -1.12
Rfx1P48377 Gm11987-201ENSMUST00000118524 381 ntBASIC8.05□□□□□ -1.12
Rfx1P48377 Gm13080-201ENSMUST00000120556 420 ntBASIC8.05□□□□□ -1.12
Rfx1P48377 Gm11834-201ENSMUST00000122257 585 ntBASIC8.05□□□□□ -1.12
Rfx1P48377 1700019G24Rik-201ENSMUST00000130004 503 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 Gm25898-201ENSMUST00000158303 106 ntBASIC8.05□□□□□ -1.12
Rfx1P48377 Clec2i-204ENSMUST00000160867 933 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 Polr3g-204ENSMUST00000161920 733 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC8.05□□□□□ -1.12
Rfx1P48377 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Rfx1P48377 Gm9167-201ENSMUST00000182469 962 ntBASIC8.05□□□□□ -1.12
Rfx1P48377 Gm29576-201ENSMUST00000188020 678 ntBASIC8.05□□□□□ -1.12
Rfx1P48377 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC8.05□□□□□ -1.12
Rfx1P48377 Gm28354-201ENSMUST00000190904 678 ntBASIC8.05□□□□□ -1.12
Rfx1P48377 2010103J01Rik-201ENSMUST00000192375 388 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 Gm38328-201ENSMUST00000195582 317 ntBASIC8.05□□□□□ -1.12
Rfx1P48377 Gm43768-201ENSMUST00000198380 1258 ntBASIC8.05□□□□□ -1.12
Rfx1P48377 Gm44403-201ENSMUST00000198554 129 ntBASIC8.05□□□□□ -1.12
Rfx1P48377 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 Gm30735-201ENSMUST00000199488 726 ntTSL 3 BASIC8.05□□□□□ -1.12
Rfx1P48377 Gm42965-201ENSMUST00000201254 250 ntBASIC8.05□□□□□ -1.12
Rfx1P48377 Gm45034-201ENSMUST00000206831 482 ntBASIC8.05□□□□□ -1.12
Rfx1P48377 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Rfx1P48377 E230032D23Rik-203ENSMUST00000208797 856 ntBASIC8.05□□□□□ -1.12
Rfx1P48377 Gm7394-201ENSMUST00000209138 1032 ntBASIC8.05□□□□□ -1.12
Rfx1P48377 Gm2767-201ENSMUST00000209582 473 ntBASIC8.05□□□□□ -1.12
Rfx1P48377 Gm17850-201ENSMUST00000210023 1154 ntBASIC8.05□□□□□ -1.12
Rfx1P48377 Gm18781-201ENSMUST00000211252 924 ntBASIC8.05□□□□□ -1.12
Rfx1P48377 AC154295.1-201ENSMUST00000217210 621 ntTSL 3 BASIC8.05□□□□□ -1.12
Rfx1P48377 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC8.05□□□□□ -1.12
Rfx1P48377 Vmn1r22-205ENSMUST00000228322 909 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Rfx1P48377 AC154806.5-204ENSMUST00000228900 867 ntBASIC8.05□□□□□ -1.12
Rfx1P48377 Clec2i-201ENSMUST00000032519 1014 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 Vmn1r225-201ENSMUST00000061660 897 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Rfx1P48377 Tas2r120-201ENSMUST00000071707 892 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Rfx1P48377 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Rfx1P48377 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Rfx1P48377 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC8.05□□□□□ -1.12
Rfx1P48377 Ogdh-202ENSMUST00000081894 4114 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC8.05□□□□□ -1.12
Rfx1P48377 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
Rfx1P48377 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 Gm42685-201ENSMUST00000200378 2390 ntBASIC8.05□□□□□ -1.12
Rfx1P48377 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC8.05□□□□□ -1.12
Rfx1P48377 Zranb1-205ENSMUST00000215716 2205 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
Rfx1P48377 Cfap57-202ENSMUST00000081921 3750 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
Rfx1P48377 Nmur2-201ENSMUST00000037682 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rfx1P48377 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rfx1P48377 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC8.04□□□□□ -1.12
Rfx1P48377 Olfr958-203ENSMUST00000217227 3831 ntAPPRIS P1 TSL 5 BASIC8.04□□□□□ -1.12
Rfx1P48377 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rfx1P48377 Vmn2r-ps21-201ENSMUST00000177115 2947 ntBASIC8.04□□□□□ -1.12
Rfx1P48377 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC8.04□□□□□ -1.12
Rfx1P48377 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
Rfx1P48377 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
Rfx1P48377 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC8.04□□□□□ -1.12
Rfx1P48377 Mir582-201ENSMUST00000103758 81 ntBASIC8.04□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 75.5 ms