Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm21816-201ENSMUST00000179255 360 ntBASIC6.18□□□□□ -1.42
HttP42859 Gm3696-202ENSMUST00000179898 612 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
HttP42859 Gm43441-201ENSMUST00000201458 205 ntBASIC6.18□□□□□ -1.42
HttP42859 Rab7-ps1-201ENSMUST00000213253 622 ntBASIC6.18□□□□□ -1.42
HttP42859 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HttP42859 Snord15b-201ENSMUST00000083032 145 ntBASIC6.18□□□□□ -1.42
HttP42859 Vmn1r89-205ENSMUST00000227276 1417 ntAPPRIS ALT2 BASIC6.18□□□□□ -1.42
HttP42859 Atr-201ENSMUST00000034980 8056 ntTSL 5 BASIC6.18□□□□□ -1.42
HttP42859 Actr6-201ENSMUST00000020109 1705 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
HttP42859 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
HttP42859 Vmn2r60-201ENSMUST00000166447 2562 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
HttP42859 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC6.18□□□□□ -1.42
HttP42859 Eya3-213ENSMUST00000180250 5020 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
HttP42859 Psg27-201ENSMUST00000094794 1942 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HttP42859 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HttP42859 BC028471-203ENSMUST00000202022 4113 ntTSL 2 BASIC6.17□□□□□ -1.42
HttP42859 Satb1-214ENSMUST00000176669 4407 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
HttP42859 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
HttP42859 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC6.17□□□□□ -1.42
HttP42859 Gm14125-202ENSMUST00000120921 756 ntBASIC6.17□□□□□ -1.42
HttP42859 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HttP42859 Gm32158-201ENSMUST00000200135 404 ntBASIC6.17□□□□□ -1.42
HttP42859 AC154450.1-201ENSMUST00000220911 485 ntBASIC6.17□□□□□ -1.42
HttP42859 CT030194.1-201ENSMUST00000225507 532 ntBASIC6.17□□□□□ -1.42
HttP42859 Olfr1537-201ENSMUST00000073248 945 ntAPPRIS P2 BASIC6.17□□□□□ -1.42
HttP42859 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
HttP42859 Olfr66-202ENSMUST00000216303 3080 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HttP42859 Rai14-207ENSMUST00000227506 4732 ntAPPRIS ALT2 BASIC6.17□□□□□ -1.42
HttP42859 Mipol1-203ENSMUST00000130447 2171 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
HttP42859 Gm9930-201ENSMUST00000066742 3151 ntBASIC6.17□□□□□ -1.42
HttP42859 Ankrd55-205ENSMUST00000223871 3209 ntBASIC6.17□□□□□ -1.42
HttP42859 Stk36-201ENSMUST00000087183 5245 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HttP42859 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HttP42859 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HttP42859 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HttP42859 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
HttP42859 Gm8256-201ENSMUST00000169178 453 ntBASIC6.17□□□□□ -1.42
HttP42859 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
HttP42859 Tex50-202ENSMUST00000178511 954 ntAPPRIS P1 TSL 3 BASIC6.17□□□□□ -1.42
HttP42859 Gm28583-201ENSMUST00000188903 2141 ntBASIC6.17□□□□□ -1.42
HttP42859 Gm9687-201ENSMUST00000189312 602 ntBASIC6.17□□□□□ -1.42
HttP42859 Gm9710-201ENSMUST00000198053 499 ntBASIC6.17□□□□□ -1.42
HttP42859 Gm18924-201ENSMUST00000211929 316 ntBASIC6.17□□□□□ -1.42
HttP42859 Gm23972-201ENSMUST00000083322 165 ntBASIC6.17□□□□□ -1.42
HttP42859 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HttP42859 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
HttP42859 Gm44113-201ENSMUST00000203510 3041 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HttP42859 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HttP42859 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
HttP42859 Ttk-202ENSMUST00000185913 2731 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HttP42859 Gm10441-201ENSMUST00000200950 1546 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HttP42859 Gm13490-201ENSMUST00000143870 2409 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HttP42859 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HttP42859 Gm42658-201ENSMUST00000197199 1575 ntBASIC6.17□□□□□ -1.42
HttP42859 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
HttP42859 Psd3-204ENSMUST00000093469 4351 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
HttP42859 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
HttP42859 Peg10-201ENSMUST00000166678 6662 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
HttP42859 Wdr76-203ENSMUST00000110602 4170 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
HttP42859 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
HttP42859 Gm16345-201ENSMUST00000146065 158 ntBASIC6.16□□□□□ -1.42
HttP42859 Gm20673-201ENSMUST00000177167 430 ntBASIC6.16□□□□□ -1.42
HttP42859 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC6.16□□□□□ -1.42
HttP42859 Gm43779-201ENSMUST00000196691 829 ntBASIC6.16□□□□□ -1.42
HttP42859 CT954323.2-201ENSMUST00000222056 213 ntBASIC6.16□□□□□ -1.42
HttP42859 Krtap31-2-201ENSMUST00000058761 935 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HttP42859 Gm24029-201ENSMUST00000083928 143 ntBASIC6.16□□□□□ -1.42
HttP42859 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC6.16□□□□□ -1.42
HttP42859 Mov10l1-201ENSMUST00000015509 4052 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
HttP42859 Hivep1-201ENSMUST00000060148 8753 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
HttP42859 Gm37773-201ENSMUST00000194141 2120 ntBASIC6.16□□□□□ -1.42
HttP42859 Zmynd8-206ENSMUST00000109269 6188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
HttP42859 Zfp142-202ENSMUST00000066986 5756 ntTSL 5 BASIC6.16□□□□□ -1.42
HttP42859 Mapkbp1-201ENSMUST00000066058 6942 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HttP42859 Fbxw22-201ENSMUST00000080626 1835 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HttP42859 Gm42679-201ENSMUST00000197086 2906 ntBASIC6.16□□□□□ -1.42
HttP42859 Olfr961-202ENSMUST00000219295 3374 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
HttP42859 AC159886.2-201ENSMUST00000214737 2740 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HttP42859 Gm12057-201ENSMUST00000117244 1427 ntBASIC6.16□□□□□ -1.42
HttP42859 AC158595.1-201ENSMUST00000217989 1435 ntBASIC6.16□□□□□ -1.42
HttP42859 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HttP42859 Olfr380-202ENSMUST00000121209 1669 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
HttP42859 B3galt5-202ENSMUST00000113800 5282 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HttP42859 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC6.16□□□□□ -1.42
HttP42859 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HttP42859 Mir708-201ENSMUST00000102189 109 ntBASIC6.16□□□□□ -1.42
HttP42859 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC6.16□□□□□ -1.42
HttP42859 Gm12874-201ENSMUST00000117190 913 ntBASIC6.16□□□□□ -1.42
HttP42859 Gm5834-201ENSMUST00000126680 1026 ntBASIC6.16□□□□□ -1.42
HttP42859 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HttP42859 Gm27611-201ENSMUST00000184690 108 ntBASIC6.16□□□□□ -1.42
HttP42859 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC6.16□□□□□ -1.42
HttP42859 Gm44316-201ENSMUST00000199274 97 ntBASIC6.16□□□□□ -1.42
HttP42859 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
HttP42859 Gm45671-201ENSMUST00000210229 3920 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HttP42859 Nup214-201ENSMUST00000065398 6605 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
HttP42859 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
HttP42859 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC6.16□□□□□ -1.42
HttP42859 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC6.16□□□□□ -1.42
HttP42859 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms