Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 AC161114.1-201ENSMUST00000218223 474 ntBASIC9.06□□□□□ -0.96
Chd1P40201 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Chd1P40201 Gm23238-201ENSMUST00000083007 164 ntBASIC9.06□□□□□ -0.96
Chd1P40201 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Chd1P40201 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC9.06□□□□□ -0.96
Chd1P40201 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Chd1P40201 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Chd1P40201 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Chd1P40201 Bnc2-201ENSMUST00000102820 4133 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Chd1P40201 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC9.06□□□□□ -0.96
Chd1P40201 Nfasc-202ENSMUST00000094569 9739 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Chd1P40201 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Chd1P40201 Gm37971-201ENSMUST00000193516 3391 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Chd1P40201 Tsr1-201ENSMUST00000045807 3389 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Chd1P40201 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC9.06□□□□□ -0.96
Chd1P40201 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Chd1P40201 Map2-204ENSMUST00000114013 6258 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Chd1P40201 Gm13089-201ENSMUST00000073532 1807 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Chd1P40201 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Chd1P40201 Ep400-203ENSMUST00000112435 10420 ntTSL 5 BASIC9.06□□□□□ -0.96
Chd1P40201 Gm45177-201ENSMUST00000209104 2307 ntBASIC9.06□□□□□ -0.96
Chd1P40201 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Chd1P40201 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Chd1P40201 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Chd1P40201 Gm14485-201ENSMUST00000119489 493 ntBASIC9.05□□□□□ -0.96
Chd1P40201 Gm43524-201ENSMUST00000197278 298 ntBASIC9.05□□□□□ -0.96
Chd1P40201 Gm18100-201ENSMUST00000200897 452 ntBASIC9.05□□□□□ -0.96
Chd1P40201 Gm34224-201ENSMUST00000204606 364 ntBASIC9.05□□□□□ -0.96
Chd1P40201 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Chd1P40201 Gm44539-201ENSMUST00000206010 238 ntBASIC9.05□□□□□ -0.96
Chd1P40201 Olfr643-202ENSMUST00000217217 945 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Chd1P40201 AC079644.3-201ENSMUST00000222452 357 ntBASIC9.05□□□□□ -0.96
Chd1P40201 Gm18247-201ENSMUST00000222937 601 ntBASIC9.05□□□□□ -0.96
Chd1P40201 AC154484.2-201ENSMUST00000228359 818 ntBASIC9.05□□□□□ -0.96
Chd1P40201 B020031M17Rik-201ENSMUST00000080505 522 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Chd1P40201 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Chd1P40201 Cx3cr1-202ENSMUST00000177637 3156 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Chd1P40201 Pkd1l3-201ENSMUST00000057344 6456 ntAPPRIS P3 TSL 1 (best) BASIC9.05□□□□□ -0.96
Chd1P40201 Alms1-201ENSMUST00000072018 9986 ntAPPRIS P2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Chd1P40201 Col6a5-201ENSMUST00000165165 8046 ntTSL 5 BASIC9.05□□□□□ -0.96
Chd1P40201 Scn2b-202ENSMUST00000170998 4656 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Chd1P40201 Mpp7-201ENSMUST00000115869 4975 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Chd1P40201 Akap2-205ENSMUST00000102903 6650 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Chd1P40201 4930583P06Rik-201ENSMUST00000136658 706 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Chd1P40201 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC9.05□□□□□ -0.96
Chd1P40201 5033404E19Rik-201ENSMUST00000192616 630 ntBASIC9.05□□□□□ -0.96
Chd1P40201 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Chd1P40201 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC9.05□□□□□ -0.96
Chd1P40201 AC154636.1-201ENSMUST00000223226 126 ntBASIC9.05□□□□□ -0.96
Chd1P40201 CT956049.1-201ENSMUST00000225671 763 ntBASIC9.05□□□□□ -0.96
Chd1P40201 Gm8412-201ENSMUST00000077493 440 ntBASIC9.05□□□□□ -0.96
Chd1P40201 Olfr894-201ENSMUST00000093866 949 ntAPPRIS P2 BASIC9.05□□□□□ -0.96
Chd1P40201 Svep1-201ENSMUST00000042850 11629 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Chd1P40201 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Chd1P40201 Acsl6-204ENSMUST00000093106 5804 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Chd1P40201 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Chd1P40201 Psg29-201ENSMUST00000075934 5445 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Chd1P40201 Nlrp3-202ENSMUST00000101148 4021 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Chd1P40201 Pcmtd2-201ENSMUST00000029116 3569 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Chd1P40201 Tbc1d24-202ENSMUST00000040474 6269 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Chd1P40201 Myt1-201ENSMUST00000081125 5327 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Chd1P40201 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Chd1P40201 Gm8980-201ENSMUST00000140232 2197 ntBASIC9.04□□□□□ -0.96
Chd1P40201 Gm19410-201ENSMUST00000207505 6352 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Chd1P40201 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Chd1P40201 Cacna1c-210ENSMUST00000187474 6911 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Chd1P40201 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Chd1P40201 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Chd1P40201 Tbx22-203ENSMUST00000168174 5217 ntAPPRIS P4 TSL 2 BASIC9.04□□□□□ -0.96
Chd1P40201 Gm12444-201ENSMUST00000121512 877 ntBASIC9.04□□□□□ -0.96
Chd1P40201 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC9.04□□□□□ -0.96
Chd1P40201 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC9.04□□□□□ -0.96
Chd1P40201 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC9.04□□□□□ -0.96
Chd1P40201 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC9.04□□□□□ -0.96
Chd1P40201 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC9.04□□□□□ -0.96
Chd1P40201 Vmn2r-ps32-201ENSMUST00000175794 757 ntBASIC9.04□□□□□ -0.96
Chd1P40201 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Chd1P40201 Ighv1-3-201ENSMUST00000192764 302 ntBASIC9.04□□□□□ -0.96
Chd1P40201 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC9.04□□□□□ -0.96
Chd1P40201 Gm44048-201ENSMUST00000204531 361 ntBASIC9.04□□□□□ -0.96
Chd1P40201 Olfr1289-202ENSMUST00000207494 1014 ntAPPRIS P2 BASIC9.04□□□□□ -0.96
Chd1P40201 Gm45608-201ENSMUST00000210948 389 ntBASIC9.04□□□□□ -0.96
Chd1P40201 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC9.04□□□□□ -0.96
Chd1P40201 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Chd1P40201 Olfr1206-201ENSMUST00000077302 924 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Chd1P40201 Glcci1-203ENSMUST00000161494 3248 ntTSL 2 BASIC9.04□□□□□ -0.96
Chd1P40201 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
Chd1P40201 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Chd1P40201 Gm26984-201ENSMUST00000182345 3510 ntBASIC9.04□□□□□ -0.96
Chd1P40201 Gm15903-202ENSMUST00000199631 3518 ntBASIC9.04□□□□□ -0.96
Chd1P40201 Gm35585-201ENSMUST00000195996 1570 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Chd1P40201 Bsn-201ENSMUST00000035208 15938 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Chd1P40201 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Chd1P40201 Zmat4-201ENSMUST00000042352 4182 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Chd1P40201 Ttll7-201ENSMUST00000037942 7394 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
Chd1P40201 AC116950.1-201ENSMUST00000226322 3250 ntBASIC9.03□□□□□ -0.96
Chd1P40201 Pik3cg-202ENSMUST00000085469 4584 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Chd1P40201 n-R5s82-201ENSMUST00000104213 109 ntBASIC9.03□□□□□ -0.96
Chd1P40201 Gm15741-201ENSMUST00000119401 754 ntBASIC9.03□□□□□ -0.96
Chd1P40201 Gm15877-201ENSMUST00000121897 964 ntBASIC9.03□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 74.4 ms