Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.1
Col18a1P39061 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC8.21□□□□□ -1.1
Col18a1P39061 Atp6v0d2-201ENSMUST00000029900 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col18a1P39061 Cyld-203ENSMUST00000109626 7945 ntAPPRIS P3 TSL 5 BASIC8.2□□□□□ -1.1
Col18a1P39061 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Col18a1P39061 Gm14842-201ENSMUST00000119577 269 ntBASIC8.2□□□□□ -1.1
Col18a1P39061 Gm12327-201ENSMUST00000121729 1168 ntBASIC8.2□□□□□ -1.1
Col18a1P39061 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC8.2□□□□□ -1.1
Col18a1P39061 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Col18a1P39061 Gm43708-201ENSMUST00000198857 961 ntBASIC8.2□□□□□ -1.1
Col18a1P39061 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Col18a1P39061 Olfr371-201ENSMUST00000070849 939 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Col18a1P39061 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col18a1P39061 Gm9386-201ENSMUST00000095195 381 ntBASIC8.2□□□□□ -1.1
Col18a1P39061 Olfr1135-201ENSMUST00000099853 933 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Col18a1P39061 Hcfc1-201ENSMUST00000033761 8138 ntAPPRIS P2 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col18a1P39061 Sec24c-202ENSMUST00000223751 4196 ntBASIC8.2□□□□□ -1.1
Col18a1P39061 Aldh1l2-206ENSMUST00000146640 3938 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Col18a1P39061 Kif9-203ENSMUST00000197248 3184 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Col18a1P39061 Pcdh15-217ENSMUST00000134009 3300 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Col18a1P39061 Ankrd6-203ENSMUST00000084749 4573 ntAPPRIS P2 TSL 5 BASIC8.2□□□□□ -1.1
Col18a1P39061 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Col18a1P39061 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col18a1P39061 Ddx6-201ENSMUST00000170489 6065 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
Col18a1P39061 Gm42679-201ENSMUST00000197086 2906 ntBASIC8.2□□□□□ -1.1
Col18a1P39061 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
Col18a1P39061 Gm23750-201ENSMUST00000104222 132 ntBASIC8.2□□□□□ -1.1
Col18a1P39061 Gm15560-201ENSMUST00000117107 643 ntBASIC8.2□□□□□ -1.1
Col18a1P39061 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC8.2□□□□□ -1.1
Col18a1P39061 Gm8524-201ENSMUST00000186232 379 ntBASIC8.2□□□□□ -1.1
Col18a1P39061 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC8.2□□□□□ -1.1
Col18a1P39061 Ighv1-35-201ENSMUST00000195265 351 ntBASIC8.2□□□□□ -1.1
Col18a1P39061 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Col18a1P39061 Gm7733-201ENSMUST00000199038 919 ntBASIC8.2□□□□□ -1.1
Col18a1P39061 Gm43235-201ENSMUST00000200121 297 ntBASIC8.2□□□□□ -1.1
Col18a1P39061 Tas2r111-ps2-201ENSMUST00000203794 901 ntBASIC8.2□□□□□ -1.1
Col18a1P39061 Gm18689-201ENSMUST00000203969 902 ntBASIC8.2□□□□□ -1.1
Col18a1P39061 A530053G22Rik-204ENSMUST00000204579 536 ntTSL 2 BASIC8.2□□□□□ -1.1
Col18a1P39061 Dlg2-216ENSMUST00000209170 1057 ntTSL 2 BASIC8.2□□□□□ -1.1
Col18a1P39061 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Col18a1P39061 Olfr622-201ENSMUST00000058744 1105 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Col18a1P39061 Gm25187-201ENSMUST00000083906 133 ntBASIC8.2□□□□□ -1.1
Col18a1P39061 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC8.2□□□□□ -1.1
Col18a1P39061 Vmn2r88-204ENSMUST00000228139 3227 ntAPPRIS ALT2 BASIC8.2□□□□□ -1.1
Col18a1P39061 Arpp21-210ENSMUST00000159451 2805 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
Col18a1P39061 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Col18a1P39061 Wdr37-202ENSMUST00000054251 4626 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Col18a1P39061 Trim5-202ENSMUST00000098179 3655 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col18a1P39061 Kdsr-201ENSMUST00000010049 5518 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col18a1P39061 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col18a1P39061 Mtif2-201ENSMUST00000020749 2425 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col18a1P39061 Gabra1-205ENSMUST00000205546 4045 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Col18a1P39061 Cwc22-201ENSMUST00000065889 3471 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col18a1P39061 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Col18a1P39061 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Col18a1P39061 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col18a1P39061 Scn2b-202ENSMUST00000170998 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col18a1P39061 Zfand6-201ENSMUST00000069537 1658 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col18a1P39061 Zfp445-206ENSMUST00000216063 6189 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col18a1P39061 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col18a1P39061 Zfp180-205ENSMUST00000207002 3690 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Col18a1P39061 Gm11318-201ENSMUST00000118640 961 ntBASIC8.19□□□□□ -1.1
Col18a1P39061 Gm11485-201ENSMUST00000120048 1175 ntBASIC8.19□□□□□ -1.1
Col18a1P39061 Mup-ps15-201ENSMUST00000121741 539 ntBASIC8.19□□□□□ -1.1
Col18a1P39061 Gm5353-201ENSMUST00000139800 793 ntBASIC8.19□□□□□ -1.1
Col18a1P39061 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
Col18a1P39061 Gm20528-202ENSMUST00000174821 802 ntTSL 3 BASIC8.19□□□□□ -1.1
Col18a1P39061 Gm8669-201ENSMUST00000183839 945 ntBASIC8.19□□□□□ -1.1
Col18a1P39061 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC8.19□□□□□ -1.1
Col18a1P39061 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC8.19□□□□□ -1.1
Col18a1P39061 Gm9238-201ENSMUST00000196181 329 ntBASIC8.19□□□□□ -1.1
Col18a1P39061 Gm32158-201ENSMUST00000200135 404 ntBASIC8.19□□□□□ -1.1
Col18a1P39061 Gm6520-201ENSMUST00000200636 410 ntBASIC8.19□□□□□ -1.1
Col18a1P39061 AC069561.2-201ENSMUST00000217596 420 ntBASIC8.19□□□□□ -1.1
Col18a1P39061 AC132384.8-201ENSMUST00000218152 1204 ntBASIC8.19□□□□□ -1.1
Col18a1P39061 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col18a1P39061 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
Col18a1P39061 Defa23-201ENSMUST00000098899 411 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col18a1P39061 Hnrnpa3-203ENSMUST00000111962 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col18a1P39061 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col18a1P39061 Uggt1-201ENSMUST00000046875 9033 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col18a1P39061 Hip1-201ENSMUST00000060311 7835 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col18a1P39061 AC153955.4-201ENSMUST00000217069 2752 ntBASIC8.19□□□□□ -1.1
Col18a1P39061 Cyp4a12a-201ENSMUST00000084343 2422 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col18a1P39061 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col18a1P39061 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col18a1P39061 Olfr338-203ENSMUST00000217511 5724 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
Col18a1P39061 Disp2-201ENSMUST00000037547 6626 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
Col18a1P39061 Zfa-ps-202ENSMUST00000180673 3420 ntBASIC8.19□□□□□ -1.1
Col18a1P39061 Zfp473-204ENSMUST00000120798 3559 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col18a1P39061 Retreg1-203ENSMUST00000226438 2783 ntBASIC8.18□□□□□ -1.1
Col18a1P39061 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col18a1P39061 Ehbp1-201ENSMUST00000045167 4821 ntAPPRIS P3 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col18a1P39061 Gm45221-201ENSMUST00000207822 2272 ntBASIC8.18□□□□□ -1.1
Col18a1P39061 Rttn-201ENSMUST00000023828 7268 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
Col18a1P39061 Cd59b-202ENSMUST00000111130 706 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
Col18a1P39061 Gm12308-201ENSMUST00000120440 389 ntBASIC8.18□□□□□ -1.1
Col18a1P39061 Gm14582-201ENSMUST00000141697 1189 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
Col18a1P39061 Gm25383-201ENSMUST00000157810 144 ntBASIC8.18□□□□□ -1.1
Col18a1P39061 Gm24940-201ENSMUST00000158326 108 ntBASIC8.18□□□□□ -1.1
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms