Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC5.06□□□□□ -1.6
Cdx1P18111 Gm43921-201ENSMUST00000204296 1792 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx1P18111 Gm14976-201ENSMUST00000117055 1394 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 Havcr2-201ENSMUST00000020668 2721 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx1P18111 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC5.06□□□□□ -1.6
Cdx1P18111 Gm37485-201ENSMUST00000192326 2953 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cdx1P18111 Olfr461-202ENSMUST00000215009 4292 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Cdx1P18111 Dock2-202ENSMUST00000101364 1616 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx1P18111 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx1P18111 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 Gm26764-201ENSMUST00000181175 2596 ntTSL 5 BASIC5.06□□□□□ -1.6
Cdx1P18111 Gm43389-201ENSMUST00000196080 2595 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cdx1P18111 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cdx1P18111 Gm25724-201ENSMUST00000104531 117 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC5.06□□□□□ -1.6
Cdx1P18111 Gm12573-201ENSMUST00000118158 286 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 Gm11609-201ENSMUST00000121926 793 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 Gm12778-201ENSMUST00000122341 333 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 Gm15743-201ENSMUST00000129645 242 ntTSL 3 BASIC5.06□□□□□ -1.6
Cdx1P18111 Gm15551-201ENSMUST00000132762 535 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx1P18111 Gm23954-201ENSMUST00000157213 353 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 Vmn1r-ps45-201ENSMUST00000174106 955 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx1P18111 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cdx1P18111 Gm10136-201ENSMUST00000183196 435 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 Gm27468-201ENSMUST00000183577 106 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 Gm27193-201ENSMUST00000184217 586 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx1P18111 Gm28885-201ENSMUST00000185615 563 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Cdx1P18111 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC5.06□□□□□ -1.6
Cdx1P18111 Gm44342-201ENSMUST00000196874 129 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 Gm18430-201ENSMUST00000197534 682 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 Gm5711-201ENSMUST00000197896 421 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 Trav13n-1-201ENSMUST00000198359 331 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cdx1P18111 Gm44383-201ENSMUST00000198940 129 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 Gm42640-201ENSMUST00000199792 1195 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 Gm3511-201ENSMUST00000199823 204 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 Gm44411-201ENSMUST00000204172 349 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 A26c2-201ENSMUST00000207359 997 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Cdx1P18111 Gm45789-201ENSMUST00000213038 364 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx1P18111 Gm35189-201ENSMUST00000219319 789 ntTSL 3 BASIC5.06□□□□□ -1.6
Cdx1P18111 Gm4808-201ENSMUST00000222283 1203 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 AC099934.5-201ENSMUST00000222699 945 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Cdx1P18111 Gm9267-201ENSMUST00000222831 404 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 AC153152.2-201ENSMUST00000223165 959 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 CT025667.1-201ENSMUST00000225872 382 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 AC154324.1-201ENSMUST00000226711 814 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 AC125405.2-201ENSMUST00000227862 383 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 Dusp21-201ENSMUST00000026018 845 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cdx1P18111 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx1P18111 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Cdx1P18111 Olfr958-201ENSMUST00000062545 942 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cdx1P18111 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Cdx1P18111 n-R5s217-201ENSMUST00000083341 116 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 Gm6455-201ENSMUST00000095015 1072 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx1P18111 Gm19368-201ENSMUST00000221258 4424 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx1P18111 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx1P18111 Tlr4-202ENSMUST00000107365 1866 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx1P18111 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Cdx1P18111 Slc17a3-204ENSMUST00000166467 4336 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
Cdx1P18111 Piga-201ENSMUST00000033754 3594 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx1P18111 AC130831.1-201ENSMUST00000224546 1474 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx1P18111 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.06□□□□□ -1.6
Cdx1P18111 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.06□□□□□ -1.6
Cdx1P18111 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx1P18111 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx1P18111 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Cdx1P18111 Gm12057-201ENSMUST00000117244 1427 ntBASIC5.06□□□□□ -1.6
Cdx1P18111 Enpp3-201ENSMUST00000020169 4253 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Cdx1P18111 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx1P18111 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.05□□□□□ -1.6
Cdx1P18111 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx1P18111 Unc13c-201ENSMUST00000075245 6633 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Cdx1P18111 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx1P18111 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx1P18111 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
Cdx1P18111 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx1P18111 Gm37137-201ENSMUST00000195138 2684 ntBASIC5.05□□□□□ -1.6
Cdx1P18111 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx1P18111 AC124680.1-201ENSMUST00000223923 1585 ntBASIC5.05□□□□□ -1.6
Cdx1P18111 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx1P18111 Gm38198-201ENSMUST00000191772 3581 ntBASIC5.05□□□□□ -1.6
Cdx1P18111 Mir697-201ENSMUST00000102316 109 ntBASIC5.05□□□□□ -1.6
Cdx1P18111 Gm23768-201ENSMUST00000104440 131 ntBASIC5.05□□□□□ -1.6
Cdx1P18111 Gm13141-201ENSMUST00000117417 456 ntBASIC5.05□□□□□ -1.6
Cdx1P18111 Gm14116-201ENSMUST00000117733 805 ntBASIC5.05□□□□□ -1.6
Cdx1P18111 Gm4886-201ENSMUST00000121874 1176 ntBASIC5.05□□□□□ -1.6
Cdx1P18111 Gm11434-201ENSMUST00000122379 629 ntBASIC5.05□□□□□ -1.6
Cdx1P18111 Gm27998-201ENSMUST00000184902 361 ntBASIC5.05□□□□□ -1.6
Cdx1P18111 Gm29356-201ENSMUST00000186935 373 ntBASIC5.05□□□□□ -1.6
Cdx1P18111 1700020G17Rik-203ENSMUST00000191286 723 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Cdx1P18111 Gm5284-201ENSMUST00000199053 903 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms