Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a1P02463 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC7.32□□□□□ -1.24
Col4a1P02463 5530400K19Rik-201ENSMUST00000193511 1916 ntBASIC7.32□□□□□ -1.24
Col4a1P02463 Mum1l1-202ENSMUST00000113042 4182 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Col4a1P02463 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a1P02463 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a1P02463 Vmn1r51-202ENSMUST00000174204 4025 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a1P02463 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a1P02463 Sc5d-201ENSMUST00000052725 4787 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a1P02463 Adarb2-201ENSMUST00000064473 6721 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a1P02463 Prkd3-201ENSMUST00000003191 5517 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a1P02463 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Col4a1P02463 Plec-203ENSMUST00000071869 14917 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a1P02463 Olfr221-205ENSMUST00000216907 2859 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Col4a1P02463 Smim8-203ENSMUST00000108132 864 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
Col4a1P02463 Magea6-202ENSMUST00000112562 1212 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
Col4a1P02463 Gm14267-201ENSMUST00000119751 496 ntBASIC7.32□□□□□ -1.24
Col4a1P02463 Tnfsf13os-202ENSMUST00000144033 578 ntTSL 5 BASIC7.32□□□□□ -1.24
Col4a1P02463 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC7.32□□□□□ -1.24
Col4a1P02463 Gm43078-201ENSMUST00000197222 168 ntBASIC7.32□□□□□ -1.24
Col4a1P02463 Gm34549-202ENSMUST00000207356 970 ntTSL 5 BASIC7.32□□□□□ -1.24
Col4a1P02463 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC7.32□□□□□ -1.24
Col4a1P02463 AC164576.1-201ENSMUST00000218783 693 ntTSL 5 BASIC7.32□□□□□ -1.24
Col4a1P02463 Magea6-201ENSMUST00000076986 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a1P02463 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Col4a1P02463 Gm11808-201ENSMUST00000089430 504 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
Col4a1P02463 Gm156-201ENSMUST00000095409 682 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
Col4a1P02463 4932431P20Rik-202ENSMUST00000141713 9288 ntBASIC7.31□□□□□ -1.24
Col4a1P02463 Gm8141-201ENSMUST00000190856 1723 ntBASIC7.31□□□□□ -1.24
Col4a1P02463 Cd96-201ENSMUST00000023336 2184 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a1P02463 Gm20768-201ENSMUST00000199527 2338 ntBASIC7.31□□□□□ -1.24
Col4a1P02463 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Col4a1P02463 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a1P02463 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a1P02463 Slc41a2-201ENSMUST00000039956 4742 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a1P02463 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a1P02463 Gm15425-201ENSMUST00000119013 2711 ntBASIC7.31□□□□□ -1.24
Col4a1P02463 Ccdc82-206ENSMUST00000217444 4736 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a1P02463 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC7.31□□□□□ -1.24
Col4a1P02463 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
Col4a1P02463 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a1P02463 Gm43503-201ENSMUST00000200033 3408 ntBASIC7.31□□□□□ -1.24
Col4a1P02463 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC7.31□□□□□ -1.24
Col4a1P02463 Spin2d-201ENSMUST00000114517 1015 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a1P02463 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC7.31□□□□□ -1.24
Col4a1P02463 Gm29594-201ENSMUST00000191181 398 ntTSL 5 BASIC7.31□□□□□ -1.24
Col4a1P02463 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a1P02463 Gria1-204ENSMUST00000151045 5361 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a1P02463 Rnd3-201ENSMUST00000017288 2828 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a1P02463 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC7.31□□□□□ -1.24
Col4a1P02463 Itih4-204ENSMUST00000168782 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a1P02463 Olfr1393-202ENSMUST00000213323 3010 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
Col4a1P02463 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
Col4a1P02463 Csde1-206ENSMUST00000197488 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a1P02463 AC161884.1-201ENSMUST00000225436 2174 ntBASIC7.3□□□□□ -1.24
Col4a1P02463 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC7.3□□□□□ -1.24
Col4a1P02463 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a1P02463 Tsc1-203ENSMUST00000113869 7702 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a1P02463 3000002C10Rik-203ENSMUST00000144161 3977 ntTSL 2 BASIC7.3□□□□□ -1.24
Col4a1P02463 Serpina9-201ENSMUST00000058464 3571 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a1P02463 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Col4a1P02463 Usf3-202ENSMUST00000119746 12708 ntAPPRIS P2 TSL 5 BASIC7.3□□□□□ -1.24
Col4a1P02463 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a1P02463 Dlg2-201ENSMUST00000074273 5278 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Col4a1P02463 Vmn1r70-203ENSMUST00000226255 4868 ntAPPRIS P2 BASIC7.3□□□□□ -1.24
Col4a1P02463 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Col4a1P02463 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a1P02463 Gm12936-201ENSMUST00000121439 301 ntBASIC7.3□□□□□ -1.24
Col4a1P02463 Gm12293-201ENSMUST00000121898 590 ntBASIC7.3□□□□□ -1.24
Col4a1P02463 Gm15335-201ENSMUST00000122442 411 ntBASIC7.3□□□□□ -1.24
Col4a1P02463 Gm23211-201ENSMUST00000122717 308 ntBASIC7.3□□□□□ -1.24
Col4a1P02463 Gm17102-201ENSMUST00000170929 906 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a1P02463 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a1P02463 Gm6526-202ENSMUST00000179860 591 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
Col4a1P02463 Gm16617-201ENSMUST00000181008 675 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a1P02463 Gm29124-201ENSMUST00000186576 452 ntBASIC7.3□□□□□ -1.24
Col4a1P02463 Gm29454-201ENSMUST00000190805 393 ntBASIC7.3□□□□□ -1.24
Col4a1P02463 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC7.3□□□□□ -1.24
Col4a1P02463 Igkv12-66-201ENSMUST00000199305 348 ntBASIC7.3□□□□□ -1.24
Col4a1P02463 Gm7181-201ENSMUST00000202197 434 ntBASIC7.3□□□□□ -1.24
Col4a1P02463 Gm42646-201ENSMUST00000202233 914 ntBASIC7.3□□□□□ -1.24
Col4a1P02463 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Col4a1P02463 Gm44053-201ENSMUST00000203364 929 ntBASIC7.3□□□□□ -1.24
Col4a1P02463 Gm44225-201ENSMUST00000203582 186 ntBASIC7.3□□□□□ -1.24
Col4a1P02463 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC7.3□□□□□ -1.24
Col4a1P02463 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC7.3□□□□□ -1.24
Col4a1P02463 Gm18587-201ENSMUST00000213736 841 ntBASIC7.3□□□□□ -1.24
Col4a1P02463 AC138284.5-201ENSMUST00000214389 652 ntBASIC7.3□□□□□ -1.24
Col4a1P02463 Gm7042-201ENSMUST00000223027 384 ntBASIC7.3□□□□□ -1.24
Col4a1P02463 Olfr694-201ENSMUST00000052535 1123 ntAPPRIS P1 TSL 3 BASIC7.3□□□□□ -1.24
Col4a1P02463 Akr1c19-201ENSMUST00000081326 1242 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a1P02463 Olfr694-202ENSMUST00000082091 948 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Col4a1P02463 Mir337-201ENSMUST00000083592 97 ntBASIC7.3□□□□□ -1.24
Col4a1P02463 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Col4a1P02463 Gm9938-201ENSMUST00000067077 1756 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
Col4a1P02463 Glce-201ENSMUST00000034785 4626 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a1P02463 Mlh3-201ENSMUST00000019378 5463 ntAPPRIS P2 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a1P02463 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Col4a1P02463 Olfr671-203ENSMUST00000217091 3225 ntTSL 5 BASIC7.3□□□□□ -1.24
Col4a1P02463 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC7.3□□□□□ -1.24
Retrieved 100 of 76,532 protein–RNA pairs in 140.1 ms