Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 4833413G10Rik-201ENSMUST00000199632 1946 ntBASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC4.87□□□□□ -1.63
Hmgb3O54879 Il22ra2-201ENSMUST00000036564 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm43668-201ENSMUST00000197014 5342 ntBASIC4.87□□□□□ -1.63
Hmgb3O54879 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Hmgb3O54879 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Hmgb3O54879 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Hmgb3O54879 Gbp3-203ENSMUST00000106222 2629 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Hmgb3O54879 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm28475-201ENSMUST00000187645 1497 ntTSL 5 BASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm37833-201ENSMUST00000194342 3256 ntBASIC4.87□□□□□ -1.63
Hmgb3O54879 AC156025.2-201ENSMUST00000225907 1533 ntBASIC4.87□□□□□ -1.63
Hmgb3O54879 Gm11516-201ENSMUST00000118450 1582 ntBASIC4.87□□□□□ -1.63
Hmgb3O54879 Pdgfd-203ENSMUST00000214892 2862 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm38036-201ENSMUST00000194586 3564 ntBASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm11290-204ENSMUST00000224688 3042 ntBASIC4.86□□□□□ -1.63
Hmgb3O54879 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm26563-201ENSMUST00000181003 1704 ntTSL 5 BASIC4.86□□□□□ -1.63
Hmgb3O54879 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm43343-201ENSMUST00000202454 1926 ntBASIC4.86□□□□□ -1.63
Hmgb3O54879 Slc9a9-201ENSMUST00000033463 3468 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmgb3O54879 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Hmgb3O54879 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm26984-201ENSMUST00000182345 3510 ntBASIC4.86□□□□□ -1.63
Hmgb3O54879 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm25546-201ENSMUST00000103977 132 ntBASIC4.86□□□□□ -1.63
Hmgb3O54879 Skint1-201ENSMUST00000117379 875 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm12713-201ENSMUST00000118404 764 ntBASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm15366-201ENSMUST00000118433 1019 ntBASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm6142-201ENSMUST00000120290 325 ntBASIC4.86□□□□□ -1.63
Hmgb3O54879 Olfr1004-ps1-201ENSMUST00000120361 580 ntBASIC4.86□□□□□ -1.63
Hmgb3O54879 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC4.86□□□□□ -1.63
Hmgb3O54879 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm12031-201ENSMUST00000156150 627 ntTSL 2 BASIC4.86□□□□□ -1.63
Hmgb3O54879 Skint1-203ENSMUST00000161389 960 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmgb3O54879 Snrpe-204ENSMUST00000166915 503 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmgb3O54879 Rsl24d1-204ENSMUST00000169399 841 ntTSL 3 BASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm26715-201ENSMUST00000181676 1095 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm5300-201ENSMUST00000182201 1003 ntBASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm5430-201ENSMUST00000182525 915 ntBASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm27156-201ENSMUST00000184589 754 ntBASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm28237-201ENSMUST00000186563 641 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm29489-201ENSMUST00000188934 324 ntBASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm20690-202ENSMUST00000195126 355 ntBASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm42461-201ENSMUST00000198627 1150 ntBASIC4.86□□□□□ -1.63
Hmgb3O54879 4933401H06Rik-201ENSMUST00000199058 827 ntTSL 3 BASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm5554-201ENSMUST00000199726 1206 ntBASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm43243-201ENSMUST00000199964 278 ntBASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm45888-201ENSMUST00000212348 1229 ntBASIC4.86□□□□□ -1.63
Hmgb3O54879 AC113204.1-203ENSMUST00000219475 375 ntTSL 3 BASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm19428-202ENSMUST00000220573 1038 ntTSL 5 BASIC4.86□□□□□ -1.63
Hmgb3O54879 AC154472.2-201ENSMUST00000221186 288 ntTSL 5 BASIC4.86□□□□□ -1.63
Hmgb3O54879 AC154431.2-201ENSMUST00000225215 1055 ntBASIC4.86□□□□□ -1.63
Hmgb3O54879 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Hmgb3O54879 Olfr1087-201ENSMUST00000099877 942 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm43857-201ENSMUST00000200343 3079 ntBASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm15789-201ENSMUST00000118992 1359 ntBASIC4.86□□□□□ -1.63
Hmgb3O54879 Tmem156-204ENSMUST00000212080 1411 ntAPPRIS P5 TSL 5 BASIC4.86□□□□□ -1.63
Hmgb3O54879 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC4.86□□□□□ -1.63
Hmgb3O54879 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmgb3O54879 Fbxo3-202ENSMUST00000102565 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmgb3O54879 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Hmgb3O54879 AC120347.1-201ENSMUST00000223326 1639 ntBASIC4.86□□□□□ -1.63
Hmgb3O54879 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC4.86□□□□□ -1.63
Hmgb3O54879 AC156569.1-201ENSMUST00000222020 3841 ntBASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
Hmgb3O54879 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Hmgb3O54879 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Hmgb3O54879 Gm43025-201ENSMUST00000201764 1886 ntBASIC4.86□□□□□ -1.63
Hmgb3O54879 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmgb3O54879 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Hmgb3O54879 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Hmgb3O54879 Rab30-201ENSMUST00000032879 9456 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmgb3O54879 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmgb3O54879 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Hmgb3O54879 Gm43011-201ENSMUST00000197897 4433 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.85□□□□□ -1.63
Hmgb3O54879 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmgb3O54879 Gm11864-201ENSMUST00000116179 1220 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 Smt3h1-ps-201ENSMUST00000117126 280 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 Gm8624-201ENSMUST00000118083 432 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 Gm13991-201ENSMUST00000120190 648 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 Gm15801-201ENSMUST00000120920 522 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 Gm5578-201ENSMUST00000121490 1236 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
Hmgb3O54879 Gm4886-201ENSMUST00000121874 1176 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 Gm14747-201ENSMUST00000149888 984 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Hmgb3O54879 Gm8783-201ENSMUST00000159764 522 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 Mir5128-201ENSMUST00000175217 84 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 Gm20685-201ENSMUST00000176654 489 ntTSL 3 BASIC4.85□□□□□ -1.63
Hmgb3O54879 Gm18875-201ENSMUST00000188563 882 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 Gm43546-201ENSMUST00000196721 943 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 Gm42713-201ENSMUST00000202709 945 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 Gm42963-201ENSMUST00000202943 1217 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 AC134333.1-201ENSMUST00000204536 944 ntBASIC4.85□□□□□ -1.63
Hmgb3O54879 Gm45136-201ENSMUST00000205793 943 ntBASIC4.85□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms