Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
Srp54bE9PXC0 Gm14886-201ENSMUST00000117208 2629 ntBASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Gm10030-203ENSMUST00000197321 3824 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
Srp54bE9PXC0 2700049A03Rik-201ENSMUST00000045907 4507 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Gm11242-201ENSMUST00000120103 2457 ntBASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Gm43282-201ENSMUST00000201848 2157 ntBASIC6.16□□□□□ -1.42
Srp54bE9PXC0 AC131747.2-201ENSMUST00000226121 1895 ntBASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Gm5797-201ENSMUST00000100886 997 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Gm3149-201ENSMUST00000112779 997 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Gm7146-201ENSMUST00000116079 739 ntBASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Gm15332-201ENSMUST00000118386 357 ntBASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Gm15237-201ENSMUST00000122104 469 ntBASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Sbp-205ENSMUST00000183017 700 ntTSL 5 BASIC6.16□□□□□ -1.42
Srp54bE9PXC0 A430093F15Rik-206ENSMUST00000189565 651 ntTSL 3 BASIC6.16□□□□□ -1.42
Srp54bE9PXC0 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Ighv5-21-201ENSMUST00000191935 295 ntBASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Gm6631-201ENSMUST00000193699 559 ntBASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Gm43436-201ENSMUST00000199308 147 ntBASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Gm43116-201ENSMUST00000199789 195 ntBASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Asb17os-202ENSMUST00000200329 497 ntTSL 3 BASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Gm10688-201ENSMUST00000214985 520 ntBASIC6.16□□□□□ -1.42
Srp54bE9PXC0 AC159622.2-201ENSMUST00000221592 983 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Srp54bE9PXC0 AC211878.5-201ENSMUST00000221697 409 ntBASIC6.16□□□□□ -1.42
Srp54bE9PXC0 CT025598.1-201ENSMUST00000225140 427 ntBASIC6.16□□□□□ -1.42
Srp54bE9PXC0 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.16□□□□□ -1.42
Srp54bE9PXC0 AC154718.1-201ENSMUST00000226676 250 ntBASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Rasef-201ENSMUST00000058292 5183 ntTSL 5 BASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Gm9968-201ENSMUST00000147504 2990 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Zbed4-ps2-201ENSMUST00000187003 3448 ntBASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Gm18066-201ENSMUST00000210904 1774 ntBASIC6.16□□□□□ -1.42
Srp54bE9PXC0 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC6.16□□□□□ -1.42
Srp54bE9PXC0 Cdc42bpa-201ENSMUST00000076687 4917 ntTSL 5 BASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Gm9314-201ENSMUST00000199881 1528 ntBASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Gm9521-201ENSMUST00000206656 1516 ntBASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Rsrc2-201ENSMUST00000050827 2344 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Adgre1-201ENSMUST00000004850 3124 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Fcgr2b-201ENSMUST00000027966 3544 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Gm5832-201ENSMUST00000121704 1582 ntBASIC6.15□□□□□ -1.42
Srp54bE9PXC0 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Srp54bE9PXC0 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Gm37332-201ENSMUST00000195853 2844 ntBASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Gm22370-201ENSMUST00000102422 83 ntBASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Gm9428-201ENSMUST00000127214 769 ntBASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Mup7-203ENSMUST00000166098 1033 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Srsx-201ENSMUST00000171714 1083 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Csnk2b-207ENSMUST00000174024 883 ntTSL 5 BASIC6.15□□□□□ -1.42
Srp54bE9PXC0 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC6.15□□□□□ -1.42
Srp54bE9PXC0 S100a2-201ENSMUST00000179550 315 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Mir7211-201ENSMUST00000184071 63 ntBASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Gm28782-201ENSMUST00000185980 414 ntTSL 3 BASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Gm5692-201ENSMUST00000187254 1057 ntBASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Gm28269-201ENSMUST00000189511 559 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Gm43132-201ENSMUST00000199106 792 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Gm5065-202ENSMUST00000207531 807 ntAPPRIS P1 TSL 3 BASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC6.15□□□□□ -1.42
Srp54bE9PXC0 AC079681.1-201ENSMUST00000219437 639 ntTSL 3 BASIC6.15□□□□□ -1.42
Srp54bE9PXC0 AC167222.2-201ENSMUST00000220014 295 ntBASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Gm9088-201ENSMUST00000220237 508 ntBASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Gm34557-201ENSMUST00000223115 375 ntTSL 3 BASIC6.15□□□□□ -1.42
Srp54bE9PXC0 AC165260.1-201ENSMUST00000224127 683 ntBASIC6.15□□□□□ -1.42
Srp54bE9PXC0 AC133283.1-201ENSMUST00000228443 859 ntBASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Mup4-201ENSMUST00000075973 922 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Fam183b-202ENSMUST00000094156 567 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
Srp54bE9PXC0 Cab39l-201ENSMUST00000022553 3037 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Srp54bE9PXC0 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC6.15□□□□□ -1.43
Srp54bE9PXC0 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Srp54bE9PXC0 AC125328.1-201ENSMUST00000226812 2265 ntBASIC6.15□□□□□ -1.43
Srp54bE9PXC0 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.43
Srp54bE9PXC0 Arl5b-201ENSMUST00000017562 6933 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
Srp54bE9PXC0 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Srp54bE9PXC0 Gm42881-201ENSMUST00000198636 3344 ntBASIC6.15□□□□□ -1.43
Srp54bE9PXC0 Ddx58-201ENSMUST00000037907 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Srp54bE9PXC0 Olfr477-202ENSMUST00000214677 2930 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
Srp54bE9PXC0 Trp63-208ENSMUST00000115310 5366 ntAPPRIS ALT1 TSL 1 (best) BASIC6.15□□□□□ -1.43
Srp54bE9PXC0 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Srp54bE9PXC0 Gm42513-201ENSMUST00000197831 2119 ntBASIC6.14□□□□□ -1.43
Srp54bE9PXC0 Olfr127-202ENSMUST00000217223 3733 ntAPPRIS P1 TSL 5 BASIC6.14□□□□□ -1.43
Srp54bE9PXC0 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Srp54bE9PXC0 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Srp54bE9PXC0 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
Srp54bE9PXC0 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms