Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC5.83□□□□□ -1.48
Col6a3E9PWQ3 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.83□□□□□ -1.48
Col6a3E9PWQ3 AC102569.1-204ENSMUST00000222816 793 ntTSL 3 BASIC5.83□□□□□ -1.48
Col6a3E9PWQ3 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a3E9PWQ3 CT009757.5-201ENSMUST00000221858 3425 ntBASIC5.83□□□□□ -1.48
Col6a3E9PWQ3 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC5.83□□□□□ -1.48
Col6a3E9PWQ3 Arhgef9-202ENSMUST00000113876 5342 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a3E9PWQ3 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a3E9PWQ3 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
Col6a3E9PWQ3 Gm42736-201ENSMUST00000200723 1353 ntBASIC5.83□□□□□ -1.48
Col6a3E9PWQ3 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
Col6a3E9PWQ3 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a3E9PWQ3 Gm10258-201ENSMUST00000091270 2123 ntBASIC5.83□□□□□ -1.48
Col6a3E9PWQ3 4921539E11Rik-201ENSMUST00000030245 2448 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Col6a3E9PWQ3 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC5.83□□□□□ -1.48
Col6a3E9PWQ3 Zmiz1-208ENSMUST00000162645 7482 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm13224-201ENSMUST00000119586 94 ntBASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm11990-201ENSMUST00000121505 897 ntBASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm3531-201ENSMUST00000162698 489 ntBASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Vmn2r96-201ENSMUST00000165692 2343 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm19029-201ENSMUST00000189923 564 ntBASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm37836-201ENSMUST00000195875 175 ntBASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm4874-201ENSMUST00000203589 691 ntBASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm8523-201ENSMUST00000211386 552 ntBASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Rgs7-201ENSMUST00000027812 1418 ntAPPRIS P3 TSL 5 BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Olfr175-ps1-201ENSMUST00000079955 1169 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 D6Ertd474e-201ENSMUST00000100817 2149 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm28395-201ENSMUST00000187794 2168 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm28571-201ENSMUST00000188922 2168 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Ypel2-201ENSMUST00000018571 4847 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Psg20-201ENSMUST00000076677 1428 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm22758-201ENSMUST00000102275 96 ntBASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm15828-201ENSMUST00000119911 522 ntBASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm6611-201ENSMUST00000163830 1272 ntBASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm29521-203ENSMUST00000216148 805 ntTSL 5 BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 AC125117.2-201ENSMUST00000228344 1140 ntBASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 AC133189.2-201ENSMUST00000228527 392 ntBASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Olfr796-201ENSMUST00000037071 933 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Ndufaf4-201ENSMUST00000029925 3632 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Prdm15-201ENSMUST00000095849 6346 ntAPPRIS P2 TSL 5 BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm28463-203ENSMUST00000191085 1498 ntTSL 5 BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm37454-202ENSMUST00000193918 1498 ntTSL 5 BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm37249-201ENSMUST00000195185 2869 ntBASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm10825-201ENSMUST00000180537 4478 ntTSL 2 BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm26581-201ENSMUST00000181953 4479 ntTSL 2 BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Ppfia2-201ENSMUST00000029404 5429 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 AC093022.3-201ENSMUST00000226569 1926 ntBASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Oxr1-205ENSMUST00000166917 2509 ntAPPRIS P1 TSL 2 BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Tmem164-203ENSMUST00000112888 4221 ntTSL 3 BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm10552-201ENSMUST00000113396 372 ntBASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm24520-201ENSMUST00000179510 110 ntBASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm5430-201ENSMUST00000182525 915 ntBASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm37882-201ENSMUST00000195254 196 ntBASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm5318-201ENSMUST00000205249 406 ntBASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm7706-202ENSMUST00000211278 590 ntTSL 3 BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Gm4963-201ENSMUST00000072718 378 ntBASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Olfr1131-201ENSMUST00000090712 930 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Zfp37-204ENSMUST00000220873 1985 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Mef2c-213ENSMUST00000197681 2753 ntTSL 5 BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
Col6a3E9PWQ3 Tdrd1-201ENSMUST00000078723 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Strada-203ENSMUST00000106867 3386 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Phactr4-202ENSMUST00000084249 2349 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 St8sia4-201ENSMUST00000043336 5390 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Jarid2-208ENSMUST00000173246 5997 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 AC154450.1-201ENSMUST00000220911 485 ntBASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Scml2-203ENSMUST00000077375 3550 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Olfr765-202ENSMUST00000216460 2594 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 AC170999.1-201ENSMUST00000226359 1585 ntBASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 B530045E10Rik-202ENSMUST00000189035 3138 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Gm32592-201ENSMUST00000205146 3124 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Fundc2-201ENSMUST00000033541 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Gm17529-201ENSMUST00000180738 3093 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Vmn1r44-208ENSMUST00000227456 2031 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
Col6a3E9PWQ3 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 83.3 ms