Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Gm20276-201ENSMUST00000216122 2648 ntBASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Vmn1r90-209ENSMUST00000227855 7362 ntAPPRIS P2 BASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Nlrp10-201ENSMUST00000055745 4504 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Gm42873-201ENSMUST00000196110 1726 ntBASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Cyp2j13-201ENSMUST00000030305 4374 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Gm18716-201ENSMUST00000204507 1603 ntBASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 Gm45413-201ENSMUST00000210389 3538 ntBASIC5.85□□□□□ -1.47
Upk3aQ9JKX8 4933406F09Rik-204ENSMUST00000181409 2078 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Ipo11-205ENSMUST00000186033 4147 ntTSL 5 BASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Ckap5-202ENSMUST00000099716 6574 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Hdac9-201ENSMUST00000110819 4413 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Gm10373-201ENSMUST00000100683 668 ntTSL 2 BASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Gm13770-201ENSMUST00000117149 305 ntBASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Gm7927-201ENSMUST00000118818 880 ntBASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Gm14842-201ENSMUST00000119577 269 ntBASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Gm11990-201ENSMUST00000121505 897 ntBASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Mir1903-201ENSMUST00000122574 80 ntBASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Gm12405-201ENSMUST00000141120 660 ntTSL 3 BASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Gm23903-201ENSMUST00000157566 131 ntBASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Gm25013-201ENSMUST00000158402 128 ntBASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Gm23386-201ENSMUST00000158585 144 ntBASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Gm24179-201ENSMUST00000158925 127 ntBASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 1700006E09Rik-203ENSMUST00000176722 608 ntTSL 3 BASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Gm20614-201ENSMUST00000177106 632 ntBASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Gm19087-201ENSMUST00000191430 946 ntBASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Gm37358-201ENSMUST00000195492 479 ntBASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Trav3n-2-201ENSMUST00000197693 334 ntBASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Trav3d-2-201ENSMUST00000199874 334 ntBASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Gm36328-201ENSMUST00000204237 432 ntTSL 3 BASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 AC124595.1-201ENSMUST00000221799 646 ntTSL 3 BASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Olfr1387-201ENSMUST00000073824 936 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Gm24454-201ENSMUST00000083349 132 ntBASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Gm25515-201ENSMUST00000083858 157 ntBASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Gm3159-202ENSMUST00000167245 1797 ntAPPRIS P5 TSL 5 BASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Serpinb5-203ENSMUST00000112730 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 4932416K20Rik-201ENSMUST00000093229 3554 ntBASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Lilra6-201ENSMUST00000038176 2103 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Gm43502-201ENSMUST00000200263 2596 ntBASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Gm37127-201ENSMUST00000192924 3036 ntBASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Gm17690-201ENSMUST00000180958 3467 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 Gm44193-201ENSMUST00000204822 2523 ntBASIC5.84□□□□□ -1.47
Upk3aQ9JKX8 C1d-201ENSMUST00000000594 2981 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Upk3aQ9JKX8 Ptbp3-212ENSMUST00000174586 6640 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
Upk3aQ9JKX8 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
Upk3aQ9JKX8 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC5.84□□□□□ -1.48
Upk3aQ9JKX8 Gm10165-201ENSMUST00000217666 2380 ntTSL 2 BASIC5.84□□□□□ -1.48
Upk3aQ9JKX8 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
Upk3aQ9JKX8 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC5.84□□□□□ -1.48
Upk3aQ9JKX8 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Olfr553-202ENSMUST00000216776 3972 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Gm4994-201ENSMUST00000118379 2187 ntBASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Abcc2-201ENSMUST00000026208 8027 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Sema3a-202ENSMUST00000095012 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Slamf6-201ENSMUST00000171330 2485 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Pias1-202ENSMUST00000214830 2492 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 AC125487.2-201ENSMUST00000219810 1300 ntBASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Dleu2-207ENSMUST00000182756 3530 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Trps1-207ENSMUST00000184885 3492 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Gm22371-201ENSMUST00000104588 130 ntBASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Fpr3-202ENSMUST00000115565 1220 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Pttg1-206ENSMUST00000121638 948 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Olfr349-ps1-201ENSMUST00000121879 609 ntBASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Gm15237-201ENSMUST00000122104 469 ntBASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Gm25117-201ENSMUST00000157194 144 ntBASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Gm26410-201ENSMUST00000157670 261 ntBASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Gm16164-201ENSMUST00000160078 468 ntBASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Dab2-209ENSMUST00000161040 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Gm17366-201ENSMUST00000167629 187 ntBASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Znrd1-203ENSMUST00000172823 454 ntTSL 5 BASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 2610528A11Rik-201ENSMUST00000179488 754 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Mir6989-201ENSMUST00000184812 65 ntBASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Gm6631-201ENSMUST00000193699 559 ntBASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Rpl7-ps7-201ENSMUST00000200912 799 ntBASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Gm7832-201ENSMUST00000202613 880 ntBASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Gm44707-201ENSMUST00000206293 1216 ntTSL 5 BASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Gm33619-201ENSMUST00000215633 662 ntTSL 2 BASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 CAAA01125382.4-201ENSMUST00000217222 774 ntBASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 AV026068-216ENSMUST00000223874 328 ntBASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 AV026068-218ENSMUST00000223980 575 ntBASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Fpr3-201ENSMUST00000054871 1268 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Zfp993-201ENSMUST00000070932 387 ntAPPRIS ALT2 TSL 3 BASIC5.83□□□□□ -1.48
Upk3aQ9JKX8 Gm10540-201ENSMUST00000097581 276 ntBASIC5.83□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 92.9 ms