Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm37142-201ENSMUST00000193718 3110 ntBASIC7.22□□□□□ -1.25
Nup88Q8CEC0 Prcp-201ENSMUST00000076052 2967 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Nup88Q8CEC0 CT025675.1-201ENSMUST00000228171 1567 ntBASIC7.22□□□□□ -1.25
Nup88Q8CEC0 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Nup88Q8CEC0 Sulf1-202ENSMUST00000177608 5598 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Nup88Q8CEC0 9230009I02Rik-201ENSMUST00000101255 1148 ntTSL 2 BASIC7.22□□□□□ -1.25
Nup88Q8CEC0 Gm24989-201ENSMUST00000104461 88 ntBASIC7.22□□□□□ -1.25
Nup88Q8CEC0 Atp5l2-ps-201ENSMUST00000120130 312 ntBASIC7.22□□□□□ -1.25
Nup88Q8CEC0 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC7.22□□□□□ -1.25
Nup88Q8CEC0 Gm26765-201ENSMUST00000180844 692 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Nup88Q8CEC0 Gm27227-201ENSMUST00000183413 633 ntTSL 3 BASIC7.22□□□□□ -1.25
Nup88Q8CEC0 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC7.22□□□□□ -1.25
Nup88Q8CEC0 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC7.22□□□□□ -1.25
Nup88Q8CEC0 Gm37604-201ENSMUST00000191749 1272 ntBASIC7.22□□□□□ -1.25
Nup88Q8CEC0 Gm17824-201ENSMUST00000197690 805 ntBASIC7.22□□□□□ -1.25
Nup88Q8CEC0 Olfr65-202ENSMUST00000209528 1106 ntAPPRIS P2 BASIC7.22□□□□□ -1.25
Nup88Q8CEC0 Amd-ps6-201ENSMUST00000214455 1003 ntBASIC7.22□□□□□ -1.25
Nup88Q8CEC0 AC167222.2-201ENSMUST00000220014 295 ntBASIC7.22□□□□□ -1.25
Nup88Q8CEC0 AC159979.1-201ENSMUST00000227927 342 ntBASIC7.22□□□□□ -1.25
Nup88Q8CEC0 AC120375.2-202ENSMUST00000228722 397 ntBASIC7.22□□□□□ -1.25
Nup88Q8CEC0 4930591A17Rik-201ENSMUST00000041998 737 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Nup88Q8CEC0 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Nup88Q8CEC0 Gm10221-201ENSMUST00000088299 309 ntBASIC7.22□□□□□ -1.25
Nup88Q8CEC0 Gm44416-201ENSMUST00000204055 2066 ntBASIC7.22□□□□□ -1.25
Nup88Q8CEC0 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Nup88Q8CEC0 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Nup88Q8CEC0 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC7.22□□□□□ -1.25
Nup88Q8CEC0 D830032E09Rik-202ENSMUST00000189497 1632 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Nup88Q8CEC0 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Nup88Q8CEC0 Zfp426-203ENSMUST00000163348 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.22□□□□□ -1.25
Nup88Q8CEC0 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Nup88Q8CEC0 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Nup88Q8CEC0 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Nup88Q8CEC0 Asb15-202ENSMUST00000117688 4371 ntAPPRIS P1 TSL 5 BASIC7.22□□□□□ -1.25
Nup88Q8CEC0 P2ry13-201ENSMUST00000040622 2528 ntAPPRIS P1 TSL 1 (best) BASIC7.22□□□□□ -1.25
Nup88Q8CEC0 CT033783.1-201ENSMUST00000220881 2884 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Nup88Q8CEC0 Gm7969-201ENSMUST00000221347 2884 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Nup88Q8CEC0 CT033783.2-201ENSMUST00000222807 2884 ntTSL 1 (best) BASIC7.22□□□□□ -1.25
Nup88Q8CEC0 Olfr536-204ENSMUST00000215340 3938 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Nup88Q8CEC0 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.25
Nup88Q8CEC0 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.25
Nup88Q8CEC0 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Nup88Q8CEC0 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC7.21□□□□□ -1.25
Nup88Q8CEC0 Vmn1r36-204ENSMUST00000226829 1923 ntAPPRIS P2 BASIC7.21□□□□□ -1.25
Nup88Q8CEC0 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Nup88Q8CEC0 Gm28928-201ENSMUST00000187286 1443 ntTSL 1 (best) BASIC7.21□□□□□ -1.25
Nup88Q8CEC0 Gm22371-201ENSMUST00000104588 130 ntBASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Gm12643-201ENSMUST00000116078 374 ntBASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Gm22103-201ENSMUST00000116733 121 ntBASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Gm26475-201ENSMUST00000116769 121 ntBASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Gm23620-201ENSMUST00000116812 121 ntBASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Gm25042-201ENSMUST00000116856 121 ntBASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Gm25540-201ENSMUST00000116880 121 ntBASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Gm15040-201ENSMUST00000118561 1241 ntBASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Gm14485-201ENSMUST00000119489 493 ntBASIC7.21□□□□□ -1.26
Nup88Q8CEC0 AA645442-201ENSMUST00000156020 285 ntTSL 2 BASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Runx2os3-201ENSMUST00000160203 738 ntTSL 3 BASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Gm26238-201ENSMUST00000175538 117 ntBASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Gm23550-201ENSMUST00000179003 121 ntBASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Gm25123-201ENSMUST00000179154 121 ntBASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Gm25353-201ENSMUST00000179366 121 ntBASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Gm22992-201ENSMUST00000179496 121 ntBASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Gm25892-201ENSMUST00000179867 121 ntBASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Gm24092-201ENSMUST00000180257 121 ntBASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Gm27460-201ENSMUST00000184213 100 ntBASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Eif4a2-224ENSMUST00000187168 1238 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Gm7266-201ENSMUST00000187999 405 ntBASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Gm28482-201ENSMUST00000189350 452 ntTSL 5 BASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Gm37770-201ENSMUST00000192855 772 ntBASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Gm44105-201ENSMUST00000204401 308 ntTSL 5 BASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Gm44020-201ENSMUST00000204618 664 ntTSL 3 BASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC7.21□□□□□ -1.26
Nup88Q8CEC0 AC135353.1-201ENSMUST00000215330 630 ntBASIC7.21□□□□□ -1.26
Nup88Q8CEC0 AC154634.3-201ENSMUST00000224589 736 ntBASIC7.21□□□□□ -1.26
Nup88Q8CEC0 AC091783.2-201ENSMUST00000224626 740 ntBASIC7.21□□□□□ -1.26
Nup88Q8CEC0 AC113125.2-201ENSMUST00000226837 362 ntBASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Mmp12-202ENSMUST00000065079 1185 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Vmn2r-ps34-202ENSMUST00000204750 1671 ntBASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Fastkd5-202ENSMUST00000179273 2424 ntAPPRIS P1 BASIC7.21□□□□□ -1.26
Nup88Q8CEC0 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Gm37725-201ENSMUST00000193965 2125 ntBASIC7.21□□□□□ -1.26
Nup88Q8CEC0 BC055402-201ENSMUST00000190488 3301 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Fkbp15-202ENSMUST00000084528 3329 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
Nup88Q8CEC0 1500004A13Rik-203ENSMUST00000183966 3743 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Nup88Q8CEC0 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Nup88Q8CEC0 Cep120-201ENSMUST00000049811 4553 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Nup88Q8CEC0 Sptlc3-202ENSMUST00000110083 2227 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Nup88Q8CEC0 Zfa-ps-201ENSMUST00000180526 2231 ntBASIC7.2□□□□□ -1.26
Nup88Q8CEC0 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Nup88Q8CEC0 Fam35a-206ENSMUST00000228626 3100 ntBASIC7.2□□□□□ -1.26
Nup88Q8CEC0 B3gnt5-203ENSMUST00000121344 4175 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Nup88Q8CEC0 Gm43637-201ENSMUST00000202206 2926 ntBASIC7.2□□□□□ -1.26
Nup88Q8CEC0 Gm25795-201ENSMUST00000104421 132 ntBASIC7.2□□□□□ -1.26
Nup88Q8CEC0 n-R5s16-201ENSMUST00000104555 119 ntBASIC7.2□□□□□ -1.26
Nup88Q8CEC0 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC7.2□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 65.5 ms