Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Gm16511-201ENSMUST00000120019 564 ntBASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Rhox3b-ps-201ENSMUST00000121045 868 ntBASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Gm15502-201ENSMUST00000121449 208 ntBASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Gm11341-201ENSMUST00000122316 447 ntBASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Gm12148-201ENSMUST00000153791 292 ntTSL 3 BASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Gm26353-201ENSMUST00000158224 255 ntBASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Gm26653-201ENSMUST00000181537 1214 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Mir7046-201ENSMUST00000183435 66 ntBASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Mir6989-201ENSMUST00000184812 65 ntBASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Gm28985-201ENSMUST00000189261 356 ntTSL 5 BASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 1700108F19Rik-206ENSMUST00000191266 857 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Gm43561-201ENSMUST00000199866 448 ntBASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Gm43867-201ENSMUST00000203860 525 ntBASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Pttg1-202ENSMUST00000020687 741 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Tespa1-202ENSMUST00000217702 1102 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Gm9321-201ENSMUST00000221179 778 ntBASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 1700019C18Rik-202ENSMUST00000221688 1047 ntTSL 5 BASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 AC118250.1-201ENSMUST00000228569 875 ntBASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Mir138-1-201ENSMUST00000083480 99 ntBASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Olfr687-201ENSMUST00000098154 938 ntBASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Utp14b-ps1-201ENSMUST00000197716 2265 ntBASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Gm9930-201ENSMUST00000066742 3151 ntBASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Gm42531-201ENSMUST00000201648 4048 ntBASIC6.02□□□□□ -1.45
Lrif1Q8CDD9 Platr8-201ENSMUST00000146110 1349 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 CT025604.1-201ENSMUST00000221111 3436 ntBASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 E330034G19Rik-203ENSMUST00000161740 1544 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Ighv1-16-201ENSMUST00000103501 294 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Ighv1-24-201ENSMUST00000103509 294 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Gm26144-201ENSMUST00000104475 132 ntBASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Gm13193-201ENSMUST00000117275 225 ntBASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Gm12583-201ENSMUST00000120677 853 ntBASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Gm13380-201ENSMUST00000124322 718 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Gm12440-201ENSMUST00000155224 1070 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Gm25374-201ENSMUST00000158158 101 ntBASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Gm23968-201ENSMUST00000175047 125 ntBASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Gm23617-201ENSMUST00000175410 95 ntBASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 1700010L04Rik-203ENSMUST00000179662 1015 ntTSL 5 BASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Mlip-214ENSMUST00000185039 1295 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Gm27804-201ENSMUST00000185135 119 ntBASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Gm5260-201ENSMUST00000186157 949 ntBASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Gm29592-201ENSMUST00000189434 370 ntBASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Gm37770-201ENSMUST00000192855 772 ntBASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Gm44097-201ENSMUST00000204112 563 ntTSL 3 BASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Gm1715-201ENSMUST00000213681 1018 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Gm6562-201ENSMUST00000221903 464 ntBASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 CT485612.1-201ENSMUST00000222555 382 ntBASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Tom1l1-202ENSMUST00000107867 2439 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Psg28-201ENSMUST00000019291 1949 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 4921534H16Rik-202ENSMUST00000162911 2838 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Olfr1295-203ENSMUST00000217772 5539 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Zmynd11-201ENSMUST00000062658 3796 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Gm19084-201ENSMUST00000222939 1762 ntBASIC6.01□□□□□ -1.45
Lrif1Q8CDD9 Gm43088-201ENSMUST00000197530 2347 ntBASIC6□□□□□ -1.45
Lrif1Q8CDD9 Gdpd4-202ENSMUST00000170049 1899 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Lrif1Q8CDD9 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC6□□□□□ -1.45
Lrif1Q8CDD9 Gm44676-201ENSMUST00000208520 3055 ntBASIC6□□□□□ -1.45
Lrif1Q8CDD9 Gm10295-201ENSMUST00000094315 2525 ntAPPRIS P1 BASIC6□□□□□ -1.45
Lrif1Q8CDD9 Psd3-214ENSMUST00000212960 4562 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
Lrif1Q8CDD9 Gm43627-201ENSMUST00000197119 2299 ntBASIC6□□□□□ -1.45
Lrif1Q8CDD9 Slc14a1-201ENSMUST00000091813 3665 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Lrif1Q8CDD9 Gm13023-201ENSMUST00000085144 1810 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
Lrif1Q8CDD9 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
Lrif1Q8CDD9 Gm43343-201ENSMUST00000202454 1926 ntBASIC6□□□□□ -1.45
Lrif1Q8CDD9 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6□□□□□ -1.45
Lrif1Q8CDD9 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6□□□□□ -1.45
Lrif1Q8CDD9 Gstm7-202ENSMUST00000106687 743 ntTSL 3 BASIC6□□□□□ -1.45
Lrif1Q8CDD9 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC6□□□□□ -1.45
Lrif1Q8CDD9 Gm8692-201ENSMUST00000118102 438 ntBASIC6□□□□□ -1.45
Lrif1Q8CDD9 Gm14098-201ENSMUST00000119295 623 ntBASIC6□□□□□ -1.45
Lrif1Q8CDD9 Nlk-ps1-201ENSMUST00000120843 1230 ntBASIC6□□□□□ -1.45
Lrif1Q8CDD9 Gm12101-201ENSMUST00000121590 390 ntBASIC6□□□□□ -1.45
Lrif1Q8CDD9 Gm15879-202ENSMUST00000150906 565 ntTSL 2 BASIC6□□□□□ -1.45
Lrif1Q8CDD9 Mir1945-201ENSMUST00000157919 78 ntBASIC6□□□□□ -1.45
Lrif1Q8CDD9 Gm4904-201ENSMUST00000178243 1195 ntBASIC6□□□□□ -1.45
Lrif1Q8CDD9 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC6□□□□□ -1.45
Lrif1Q8CDD9 Gm29489-201ENSMUST00000188934 324 ntBASIC6□□□□□ -1.45
Lrif1Q8CDD9 Gm28455-201ENSMUST00000189105 1290 ntBASIC6□□□□□ -1.45
Lrif1Q8CDD9 1700031M16Rik-205ENSMUST00000189907 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
Lrif1Q8CDD9 Gm37838-201ENSMUST00000194464 312 ntBASIC6□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms